Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AC124864.1-201ENST00000623408 392 ntBASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 AC087499.1-201ENST00000418141 1075 ntBASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 TSPY5P-201ENST00000426936 936 ntBASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 AC117947.1-201ENST00000427448 529 ntBASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 DUX4L17-201ENST00000557360 1267 ntBASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC00242Q5T6M2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC00242Q5T6M2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms