Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 SNX33P1-201ENST00000592116 1762 ntBASIC15.6■□□□□ 0.09
NKX2-2O95096 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.6■□□□□ 0.09
NKX2-2O95096 AC009947.1-201ENST00000444350 727 ntBASIC15.6■□□□□ 0.09
NKX2-2O95096 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.6■□□□□ 0.09
NKX2-2O95096 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.6■□□□□ 0.09
NKX2-2O95096 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.6■□□□□ 0.09
NKX2-2O95096 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.6■□□□□ 0.09
NKX2-2O95096 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 AC099398.1-201ENST00000567919 2776 ntBASIC15.6■□□□□ 0.09
NKX2-2O95096 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.6■□□□□ 0.09
NKX2-2O95096 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NKX2-2O95096 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.59■□□□□ 0.09
NKX2-2O95096 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.59■□□□□ 0.09
NKX2-2O95096 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NKX2-2O95096 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
NKX2-2O95096 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
NKX2-2O95096 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 FAM185BP-201ENST00000443595 716 ntBASIC15.59■□□□□ 0.09
NKX2-2O95096 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 RNA5SP415-201ENST00000517246 115 ntBASIC15.59■□□□□ 0.09
NKX2-2O95096 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.59■□□□□ 0.09
NKX2-2O95096 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.59■□□□□ 0.09
NKX2-2O95096 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 AL121894.2-201ENST00000602977 491 ntBASIC15.59■□□□□ 0.09
NKX2-2O95096 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.59■□□□□ 0.09
NKX2-2O95096 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NKX2-2O95096 AC092171.3-201ENST00000610122 2651 ntBASIC15.59■□□□□ 0.09
NKX2-2O95096 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NKX2-2O95096 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NKX2-2O95096 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NKX2-2O95096 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NKX2-2O95096 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.58■□□□□ 0.09
NKX2-2O95096 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
NKX2-2O95096 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NKX2-2O95096 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NKX2-2O95096 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.58■□□□□ 0.09
NKX2-2O95096 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.58■□□□□ 0.09
NKX2-2O95096 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.58■□□□□ 0.08
NKX2-2O95096 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
NKX2-2O95096 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms