RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
KNOP1-205ENST00000568230 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
KNOP1-205ENST00000568230 ABCC9O60706 1549 aa36.85■■■■□ 3.49
KNOP1-205ENST00000568230 RB1CC1Q8TDY2 1594 aa35.41■■■■□ 3.26
KNOP1-205ENST00000568230 NACADO15069 1562 aa35.34■■■■□ 3.25
KNOP1-205ENST00000568230 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
KNOP1-205ENST00000568230 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
KNOP1-205ENST00000568230 ZCCHC6Q5VYS8 1495 aaKnown RBP35.07■■■■□ 3.2
KNOP1-205ENST00000568230 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
KNOP1-205ENST00000568230 UNC13AQ9UPW8 1703 aa34.64■■■■□ 3.14
KNOP1-205ENST00000568230 BICRAQ9NZM4 1560 aa34.38■■■■□ 3.09
KNOP1-205ENST00000568230 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.09
KNOP1-205ENST00000568230 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
KNOP1-205ENST00000568230 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
KNOP1-205ENST00000568230 DNAJC5BQ9UF47 199 aa33.99■■■■□ 3.03
KNOP1-205ENST00000568230 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
KNOP1-205ENST00000568230 CC2D2AQ9P2K1 1620 aa33.37■■■□□ 2.93
KNOP1-205ENST00000568230 CECR2Q9BXF3 1484 aa33.16■■■□□ 2.9
KNOP1-205ENST00000568230 SMARCA4P51532 1647 aa32.74■■■□□ 2.83
KNOP1-205ENST00000568230 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
KNOP1-205ENST00000568230 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
KNOP1-205ENST00000568230 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
KNOP1-205ENST00000568230 SMARCA2P51531 1590 aa32.55■■■□□ 2.8
KNOP1-205ENST00000568230 HMGXB3Q12766 1538 aa32.46■■■□□ 2.79
KNOP1-205ENST00000568230 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.79
KNOP1-205ENST00000568230 MROH2BQ7Z745 1585 aa32.44■■■□□ 2.78
KNOP1-205ENST00000568230 BAZ1BQ9UIG0 1483 aaKnown RBP32.3■■■□□ 2.76
KNOP1-205ENST00000568230 WIZO95785 1651 aa32.07■■■□□ 2.72
KNOP1-205ENST00000568230 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
KNOP1-205ENST00000568230 NESP48681 1621 aa31.85■■■□□ 2.69
KNOP1-205ENST00000568230 ERCC6Q03468 1493 aa31.79■■■□□ 2.68
KNOP1-205ENST00000568230 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
KNOP1-205ENST00000568230 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
KNOP1-205ENST00000568230 CADPSQ9ULU8 1353 aa31.61■■■□□ 2.65
KNOP1-205ENST00000568230 CUX2O14529 1486 aa31.57■■■□□ 2.65
KNOP1-205ENST00000568230 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
KNOP1-205ENST00000568230 KIF21AQ7Z4S6 1674 aa31.5■■■□□ 2.63
KNOP1-205ENST00000568230 THOC2Q8NI27 1593 aaKnown RBP31.48■■■□□ 2.63
KNOP1-205ENST00000568230 CFTRP13569 1480 aa31.42■■■□□ 2.62
KNOP1-205ENST00000568230 CCDC88BA6NC98 1476 aa31.34■■■□□ 2.61
KNOP1-205ENST00000568230 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
KNOP1-205ENST00000568230 MRC2Q9UBG0 1479 aa31.25■■■□□ 2.59
KNOP1-205ENST00000568230 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
KNOP1-205ENST00000568230 PRDM2Q13029 1718 aa31.2■■■□□ 2.59
KNOP1-205ENST00000568230 WDR62O43379 1518 aa31.19■■■□□ 2.58
KNOP1-205ENST00000568230 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
KNOP1-205ENST00000568230 SUPT5HO00267 1087 aaKnown RBP30.91■■■□□ 2.54
KNOP1-205ENST00000568230 DNAJC5Q9H3Z4 198 aa30.76■■■□□ 2.52
KNOP1-205ENST00000568230 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
KNOP1-205ENST00000568230 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
KNOP1-205ENST00000568230 DNMBPQ6XZF7 1577 aa30.72■■■□□ 2.51
KNOP1-205ENST00000568230 IFT140Q96RY7 1462 aa30.61■■■□□ 2.49
KNOP1-205ENST00000568230 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
KNOP1-205ENST00000568230 ZNF608Q9ULD9 1512 aaPredicted RBP30.48■■■□□ 2.47
KNOP1-205ENST00000568230 TARBP1Q13395 1621 aaKnown RBP30.46■■■□□ 2.47
KNOP1-205ENST00000568230 CUX1P39880 1505 aa30.45■■■□□ 2.47
KNOP1-205ENST00000568230 EIF4G3O43432 1585 aaKnown RBP30.39■■■□□ 2.46
KNOP1-205ENST00000568230 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
KNOP1-205ENST00000568230 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
KNOP1-205ENST00000568230 SOGA1O94964 1423 aa30.3■■■□□ 2.44
KNOP1-205ENST00000568230 AQRO60306 1485 aaKnown RBP eCLIP30.25■■■□□ 2.432e-6■■■□□ 15.1
KNOP1-205ENST00000568230 WDR97A6NE52 1622 aa30.24■■■□□ 2.43
KNOP1-205ENST00000568230 WRNQ14191 1432 aaPredicted RBP eCLIP30.16■■■□□ 2.42
KNOP1-205ENST00000568230 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
KNOP1-205ENST00000568230 BIVM-ERCC5R4GMW8 1640 aa30.16■■■□□ 2.42
KNOP1-205ENST00000568230 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
KNOP1-205ENST00000568230 OSCARQ8IYS5 282 aa30.14■■■□□ 2.42
KNOP1-205ENST00000568230 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
KNOP1-205ENST00000568230 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
KNOP1-205ENST00000568230 CHD1O14646 1710 aa30.02■■■□□ 2.4
KNOP1-205ENST00000568230 ABCA5Q8WWZ7 1642 aa30.01■■■□□ 2.39
KNOP1-205ENST00000568230 GRIN2BQ13224 1484 aa30.01■■■□□ 2.39
KNOP1-205ENST00000568230 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
KNOP1-205ENST00000568230 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
KNOP1-205ENST00000568230 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
KNOP1-205ENST00000568230 PBRM1Q86U86 1689 aa29.96■■■□□ 2.39
KNOP1-205ENST00000568230 SYNJ2O15056 1496 aa29.85■■■□□ 2.37
KNOP1-205ENST00000568230 FBLN2P98095 1184 aa29.85■■■□□ 2.37
KNOP1-205ENST00000568230 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
KNOP1-205ENST00000568230 RIMBP3CA6NJZ7 1639 aa29.75■■■□□ 2.35
KNOP1-205ENST00000568230 RIMBP3BA6NNM3 1639 aa29.75■■■□□ 2.35
KNOP1-205ENST00000568230 RIMBP3Q9UFD9 1639 aa29.75■■■□□ 2.35
KNOP1-205ENST00000568230 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
KNOP1-205ENST00000568230 ARHGEF11O15085 1522 aa29.73■■■□□ 2.35
KNOP1-205ENST00000568230 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
KNOP1-205ENST00000568230 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
KNOP1-205ENST00000568230 GRIN2AQ12879 1464 aa29.64■■■□□ 2.33
KNOP1-205ENST00000568230 FHAD1B1AJZ9 1412 aa29.63■■■□□ 2.33
KNOP1-205ENST00000568230 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
KNOP1-205ENST00000568230 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
KNOP1-205ENST00000568230 NUP160Q12769 1436 aa29.53■■■□□ 2.32
KNOP1-205ENST00000568230 CEP170Q5SW79 1584 aa29.51■■■□□ 2.31
KNOP1-205ENST00000568230 ARAP1Q96P48 1450 aa29.49■■■□□ 2.31
KNOP1-205ENST00000568230 IGF1RP08069 1367 aa29.44■■■□□ 2.3
KNOP1-205ENST00000568230 CUL7Q14999 1698 aa29.42■■■□□ 2.3
KNOP1-205ENST00000568230 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
KNOP1-205ENST00000568230 SHROOM2Q13796 1616 aa29.35■■■□□ 2.29
KNOP1-205ENST00000568230 RUSC2Q8N2Y8 1516 aa29.31■■■□□ 2.28
KNOP1-205ENST00000568230 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
KNOP1-205ENST00000568230 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms