RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 PELP1Q8IZL8 1130 aaKnown RBP29.7■■■□□ 2.35
SPTBN4-204ENST00000392025 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
SPTBN4-204ENST00000392025 MYT1Q01538 1121 aa29.07■■■□□ 2.24
SPTBN4-204ENST00000392025 CCER1Q8TC90 406 aaPredicted RBP28.19■■■□□ 2.1
SPTBN4-204ENST00000392025 ERICH6Q7L0X2 663 aa28.03■■■□□ 2.08
SPTBN4-204ENST00000392025 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
SPTBN4-204ENST00000392025 CENPBP07199 599 aaPredicted RBP27.7■■■□□ 2.03
SPTBN4-204ENST00000392025 APLP2Q06481 763 aa27.67■■■□□ 2.02
SPTBN4-204ENST00000392025 SUPT5HO00267 1087 aaKnown RBP27.61■■■□□ 2.01
SPTBN4-204ENST00000392025 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
SPTBN4-204ENST00000392025 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
SPTBN4-204ENST00000392025 ZEB1P37275 1124 aaPredicted RBP27.21■■□□□ 1.95
SPTBN4-204ENST00000392025 TTBK1Q5TCY1 1321 aaPredicted RBP27.16■■□□□ 1.94
SPTBN4-204ENST00000392025 NEFLP07196 543 aa27■■□□□ 1.91
SPTBN4-204ENST00000392025 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
SPTBN4-204ENST00000392025 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
SPTBN4-204ENST00000392025 DAXXQ9UER7 740 aaPredicted RBP26.58■■□□□ 1.85
SPTBN4-204ENST00000392025 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
SPTBN4-204ENST00000392025 ATP1B4Q9UN42 357 aaPredicted RBP26.27■■□□□ 1.8
SPTBN4-204ENST00000392025 RTL5Q5HYW3 569 aaPredicted RBP26.17■■□□□ 1.78
SPTBN4-204ENST00000392025 RANGAP1P46060 587 aaPredicted RBP25.94■■□□□ 1.74
SPTBN4-204ENST00000392025 UBTFP17480 764 aaKnown RBP25.91■■□□□ 1.74
SPTBN4-204ENST00000392025 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
SPTBN4-204ENST00000392025 ZNF316A6NFI3 1004 aaPredicted RBP25.84■■□□□ 1.73
SPTBN4-204ENST00000392025 MYT1LQ9UL68 1186 aa25.72■■□□□ 1.71
SPTBN4-204ENST00000392025 GLIPR1L2Q4G1C9 344 aa25.68■■□□□ 1.7
SPTBN4-204ENST00000392025 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
SPTBN4-204ENST00000392025 HRCP23327 699 aa25.4■■□□□ 1.66
SPTBN4-204ENST00000392025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.37■■□□□ 1.65
SPTBN4-204ENST00000392025 HNRNPUL2Q1KMD3 747 aaKnown RBP25.37■■□□□ 1.65
SPTBN4-204ENST00000392025 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
SPTBN4-204ENST00000392025 POLR3GLQ9BT43 218 aa25.25■■□□□ 1.63
SPTBN4-204ENST00000392025 SLC4A1APQ9BWU0 796 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-204ENST00000392025 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
SPTBN4-204ENST00000392025 ZBTB47Q9UFB7 747 aaPredicted RBP25.02■■□□□ 1.6
SPTBN4-204ENST00000392025 ANP32BQ92688 251 aaKnown RBP25.01■■□□□ 1.59
SPTBN4-204ENST00000392025 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
SPTBN4-204ENST00000392025 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
SPTBN4-204ENST00000392025 EIF5BO60841 1220 aaKnown RBP24.94■■□□□ 1.58
SPTBN4-204ENST00000392025 ITGAEP38570 1179 aa24.93■■□□□ 1.58
SPTBN4-204ENST00000392025 ANP32AP39687 249 aaKnown RBP24.89■■□□□ 1.58
SPTBN4-204ENST00000392025 GTF3C3Q9Y5Q9 886 aa24.72■■□□□ 1.55
SPTBN4-204ENST00000392025 NEFMP07197 916 aa24.71■■□□□ 1.55
SPTBN4-204ENST00000392025 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.53
SPTBN4-204ENST00000392025 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
SPTBN4-204ENST00000392025 TNNT2P45379 298 aaPredicted RBP24.56■■□□□ 1.52
SPTBN4-204ENST00000392025 SLC24A1O60721 1099 aa24.53■■□□□ 1.52
SPTBN4-204ENST00000392025 CANXP27824 592 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-204ENST00000392025 FAM50AQ14320 339 aaKnown RBP24.46■■□□□ 1.51
SPTBN4-204ENST00000392025 ANP32CO43423 234 aa24.46■■□□□ 1.51
SPTBN4-204ENST00000392025 TRIM52Q96A61 297 aa24.44■■□□□ 1.5
SPTBN4-204ENST00000392025 BCANQ96GW7 911 aa24.38■■□□□ 1.49
SPTBN4-204ENST00000392025 UPF2Q9HAU5 1272 aaKnown RBP24.36■■□□□ 1.49
SPTBN4-204ENST00000392025 ACIN1Q9UKV3 1341 aaKnown RBP24.34■■□□□ 1.49
SPTBN4-204ENST00000392025 HSP90AA1P07900 732 aaKnown RBP24.3■■□□□ 1.48
SPTBN4-204ENST00000392025 ANP32EQ9BTT0 268 aa24.23■■□□□ 1.47
SPTBN4-204ENST00000392025 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
SPTBN4-204ENST00000392025 TRIM44Q96DX7 344 aaPredicted RBP24.2■■□□□ 1.47
SPTBN4-204ENST00000392025 ZNF326Q5BKZ1 582 aaKnown RBP24.1■■□□□ 1.45
SPTBN4-204ENST00000392025 NEUROD1Q13562 356 aa24.09■■□□□ 1.45
SPTBN4-204ENST00000392025 NCLP19338 710 aaKnown RBP24.09■■□□□ 1.45
SPTBN4-204ENST00000392025 CDK11BP21127 795 aaKnown RBP24.05■■□□□ 1.44
SPTBN4-204ENST00000392025 NPM2Q86SE8 214 aaKnown RBP24.02■■□□□ 1.44
SPTBN4-204ENST00000392025 FBLN2P98095 1184 aa24.01■■□□□ 1.43
SPTBN4-204ENST00000392025 BCL11AQ9H165 835 aa24■■□□□ 1.43
SPTBN4-204ENST00000392025 ERICH6BQ5W0A0 696 aa23.96■■□□□ 1.43
SPTBN4-204ENST00000392025 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
SPTBN4-204ENST00000392025 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
SPTBN4-204ENST00000392025 NBR1Q14596 966 aa23.88■■□□□ 1.41
SPTBN4-204ENST00000392025 DDRGK1Q96HY6 314 aa23.86■■□□□ 1.41
SPTBN4-204ENST00000392025 BECN1Q14457 450 aa23.79■■□□□ 1.4
SPTBN4-204ENST00000392025 FKBP8Q14318 412 aa23.77■■□□□ 1.4
SPTBN4-204ENST00000392025 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.75■■□□□ 1.39
SPTBN4-204ENST00000392025 GOLGA6L22H0YM25 854 aa23.75■■□□□ 1.39
SPTBN4-204ENST00000392025 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
SPTBN4-204ENST00000392025 ABCC9O60706 1549 aa23.7■■□□□ 1.38
SPTBN4-204ENST00000392025 CCDC136Q96JN2 1154 aa23.66■■□□□ 1.38
SPTBN4-204ENST00000392025 MYH16Q9H6N6 1097 aa23.63■■□□□ 1.37
SPTBN4-204ENST00000392025 TONSLQ96HA7 1378 aa23.57■■□□□ 1.36
SPTBN4-204ENST00000392025 DNTTIP2Q5QJE6 756 aaKnown RBP23.56■■□□□ 1.36
SPTBN4-204ENST00000392025 ZNF777Q9ULD5 760 aaPredicted RBP23.56■■□□□ 1.36
SPTBN4-204ENST00000392025 NAP1L5Q96NT1 182 aaPredicted RBP23.56■■□□□ 1.36
SPTBN4-204ENST00000392025 PPM1GO15355 546 aaPredicted RBP23.55■■□□□ 1.36
SPTBN4-204ENST00000392025 ARXQ96QS3 562 aa23.52■■□□□ 1.36
SPTBN4-204ENST00000392025 PTMAP06454 111 aaKnown RBP23.51■■□□□ 1.35
SPTBN4-204ENST00000392025 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
SPTBN4-204ENST00000392025 CHGAP10645 457 aaKnown RBP23.5■■□□□ 1.35
SPTBN4-204ENST00000392025 CHAF1AQ13111 956 aaPredicted RBP23.48■■□□□ 1.35
SPTBN4-204ENST00000392025 ZRSR1Q15695 479 aaKnown RBP23.46■■□□□ 1.35
SPTBN4-204ENST00000392025 GOLGA6L6A8MZA4 724 aa23.46■■□□□ 1.35
SPTBN4-204ENST00000392025 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
SPTBN4-204ENST00000392025 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
SPTBN4-204ENST00000392025 NRDCO43847 1150 aa23.43■■□□□ 1.34
SPTBN4-204ENST00000392025 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
SPTBN4-204ENST00000392025 TMC1Q8TDI8 760 aa23.38■■□□□ 1.33
SPTBN4-204ENST00000392025 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
SPTBN4-204ENST00000392025 A0A0G2JS52 829 aa23.31■■□□□ 1.32
SPTBN4-204ENST00000392025 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
SPTBN4-204ENST00000392025 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
SPTBN4-204ENST00000392025 L1TD1Q5T7N2 865 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms