Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPH3AQ9Y2J0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPH3AQ9Y2J0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPH3AQ9Y2J0 TSPY13P-201ENST00000338964 914 ntBASIC21.93■■□□□ 1.1
RPH3AQ9Y2J0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RPH3AQ9Y2J0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPH3AQ9Y2J0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPH3AQ9Y2J0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPH3AQ9Y2J0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RPH3AQ9Y2J0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.91■■□□□ 1.1
RPH3AQ9Y2J0 AC018755.3-202ENST00000596210 929 ntBASIC21.91■■□□□ 1.1
RPH3AQ9Y2J0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPH3AQ9Y2J0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RPH3AQ9Y2J0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPH3AQ9Y2J0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RPH3AQ9Y2J0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
RPH3AQ9Y2J0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPH3AQ9Y2J0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPH3AQ9Y2J0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.88■■□□□ 1.09
RPH3AQ9Y2J0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPH3AQ9Y2J0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.87■■□□□ 1.09
RPH3AQ9Y2J0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.87■■□□□ 1.09
RPH3AQ9Y2J0 MIR6765-201ENST00000614092 87 ntBASIC21.87■■□□□ 1.09
RPH3AQ9Y2J0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPH3AQ9Y2J0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.87■■□□□ 1.09
RPH3AQ9Y2J0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPH3AQ9Y2J0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.86■■□□□ 1.09
RPH3AQ9Y2J0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPH3AQ9Y2J0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RPH3AQ9Y2J0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPH3AQ9Y2J0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPH3AQ9Y2J0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPH3AQ9Y2J0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPH3AQ9Y2J0 AC091060.1-201ENST00000623524 1766 ntBASIC21.84■■□□□ 1.09
RPH3AQ9Y2J0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPH3AQ9Y2J0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.83■■□□□ 1.08
RPH3AQ9Y2J0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 BHLHE23-202ENST00000612929 1109 ntBASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
RPH3AQ9Y2J0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 AC092803.2-201ENST00000564287 1899 ntBASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 ERN1-208ENST00000606895 2068 ntBASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.81■■□□□ 1.08
RPH3AQ9Y2J0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPH3AQ9Y2J0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPH3AQ9Y2J0 AC145676.1-201ENST00000514988 2004 ntBASIC21.8■■□□□ 1.08
RPH3AQ9Y2J0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPH3AQ9Y2J0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.8■■□□□ 1.08
RPH3AQ9Y2J0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPH3AQ9Y2J0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 RARRES2P1-201ENST00000474487 481 ntBASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 AC139795.1-202ENST00000500444 432 ntBASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.79■■□□□ 1.08
RPH3AQ9Y2J0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms