Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AC010980.1-201ENST00000587192 1142 ntBASIC26.77■■□□□ 1.88
ATP6V0A4Q9HBG4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
ATP6V0A4Q9HBG4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V0A4Q9HBG4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ATP6V0A4Q9HBG4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.76■■□□□ 1.87
ATP6V0A4Q9HBG4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V0A4Q9HBG4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V0A4Q9HBG4 AC139795.1-202ENST00000500444 432 ntBASIC26.76■■□□□ 1.87
ATP6V0A4Q9HBG4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V0A4Q9HBG4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ATP6V0A4Q9HBG4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.75■■□□□ 1.87
ATP6V0A4Q9HBG4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.75■■□□□ 1.87
ATP6V0A4Q9HBG4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.75■■□□□ 1.87
ATP6V0A4Q9HBG4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V0A4Q9HBG4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.73■■□□□ 1.87
ATP6V0A4Q9HBG4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.72■■□□□ 1.87
ATP6V0A4Q9HBG4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6V0A4Q9HBG4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6V0A4Q9HBG4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
ATP6V0A4Q9HBG4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP6V0A4Q9HBG4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 AL451085.2-201ENST00000605085 799 ntBASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 AL035685.1-201ENST00000636663 812 ntBASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 KRT8P33-201ENST00000508125 1423 ntBASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.7■■□□□ 1.86
ATP6V0A4Q9HBG4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V0A4Q9HBG4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V0A4Q9HBG4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.69■■□□□ 1.86
ATP6V0A4Q9HBG4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V0A4Q9HBG4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
ATP6V0A4Q9HBG4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6V0A4Q9HBG4 KRT18P10-201ENST00000388836 1287 ntBASIC26.67■■□□□ 1.86
ATP6V0A4Q9HBG4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6V0A4Q9HBG4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6V0A4Q9HBG4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6V0A4Q9HBG4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6V0A4Q9HBG4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP6V0A4Q9HBG4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 RPS2P7-201ENST00000447334 885 ntBASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6V0A4Q9HBG4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 YBX1P4-201ENST00000392794 808 ntBASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 AC087393.1-201ENST00000582896 145 ntBASIC26.64■■□□□ 1.86
ATP6V0A4Q9HBG4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATP6V0A4Q9HBG4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATP6V0A4Q9HBG4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATP6V0A4Q9HBG4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ATP6V0A4Q9HBG4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ATP6V0A4Q9HBG4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
ATP6V0A4Q9HBG4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.62■■□□□ 1.85
ATP6V0A4Q9HBG4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms