Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NECTIN4Q96NY8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NECTIN4Q96NY8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NECTIN4Q96NY8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
NECTIN4Q96NY8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NECTIN4Q96NY8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NECTIN4Q96NY8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
NECTIN4Q96NY8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NECTIN4Q96NY8 AC131281.2-201ENST00000520478 145 ntBASIC25.21■■□□□ 1.63
NECTIN4Q96NY8 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.21■■□□□ 1.63
NECTIN4Q96NY8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.21■■□□□ 1.63
NECTIN4Q96NY8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
NECTIN4Q96NY8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NECTIN4Q96NY8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NECTIN4Q96NY8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.2■■□□□ 1.62
NECTIN4Q96NY8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.2■■□□□ 1.62
NECTIN4Q96NY8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.2■■□□□ 1.62
NECTIN4Q96NY8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NECTIN4Q96NY8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.19■■□□□ 1.62
NECTIN4Q96NY8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NECTIN4Q96NY8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NECTIN4Q96NY8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NECTIN4Q96NY8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NECTIN4Q96NY8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.18■■□□□ 1.62
NECTIN4Q96NY8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
NECTIN4Q96NY8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NECTIN4Q96NY8 AL136116.3-201ENST00000402907 1138 ntBASIC25.17■■□□□ 1.62
NECTIN4Q96NY8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NECTIN4Q96NY8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
NECTIN4Q96NY8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NECTIN4Q96NY8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
NECTIN4Q96NY8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.16■■□□□ 1.62
NECTIN4Q96NY8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NECTIN4Q96NY8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.16■■□□□ 1.62
NECTIN4Q96NY8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.15■■□□□ 1.62
NECTIN4Q96NY8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.15■■□□□ 1.62
NECTIN4Q96NY8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NECTIN4Q96NY8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.15■■□□□ 1.62
NECTIN4Q96NY8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NECTIN4Q96NY8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
NECTIN4Q96NY8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NECTIN4Q96NY8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.14■■□□□ 1.62
NECTIN4Q96NY8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NECTIN4Q96NY8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
NECTIN4Q96NY8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NECTIN4Q96NY8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 AL117332.1-201ENST00000622628 974 ntBASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.12■■□□□ 1.61
NECTIN4Q96NY8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 AC010997.5-201ENST00000609182 354 ntBASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.11■■□□□ 1.61
NECTIN4Q96NY8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 MIR3621-201ENST00000580529 85 ntBASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 MIR4281-201ENST00000580852 62 ntBASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NECTIN4Q96NY8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 MIR6724-1-201ENST00000616420 92 ntBASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 MIR6724-2-201ENST00000616483 92 ntBASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 MIR6724-4-201ENST00000617390 92 ntBASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 MIR6724-3-201ENST00000622482 92 ntBASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
NECTIN4Q96NY8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
NECTIN4Q96NY8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
NECTIN4Q96NY8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.08■■□□□ 1.61
NECTIN4Q96NY8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
NECTIN4Q96NY8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.08■■□□□ 1.61
NECTIN4Q96NY8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NECTIN4Q96NY8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.07■■□□□ 1.6
NECTIN4Q96NY8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.07■■□□□ 1.6
NECTIN4Q96NY8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NECTIN4Q96NY8 MTDHP2-201ENST00000601468 714 ntBASIC25.07■■□□□ 1.6
NECTIN4Q96NY8 AL356740.2-201ENST00000601559 647 ntBASIC25.07■■□□□ 1.6
NECTIN4Q96NY8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms