Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.48■■□□□ 1.51
GRIN3AQ8TCU5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
GRIN3AQ8TCU5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.48■■□□□ 1.51
GRIN3AQ8TCU5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
GRIN3AQ8TCU5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GRIN3AQ8TCU5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.47■■□□□ 1.51
GRIN3AQ8TCU5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GRIN3AQ8TCU5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
GRIN3AQ8TCU5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 AC139795.1-202ENST00000500444 432 ntBASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
GRIN3AQ8TCU5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GRIN3AQ8TCU5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
GRIN3AQ8TCU5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GRIN3AQ8TCU5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
GRIN3AQ8TCU5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
GRIN3AQ8TCU5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.44■■□□□ 1.5
GRIN3AQ8TCU5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
GRIN3AQ8TCU5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
GRIN3AQ8TCU5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
GRIN3AQ8TCU5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GRIN3AQ8TCU5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 AC010980.1-201ENST00000587192 1142 ntBASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
GRIN3AQ8TCU5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GRIN3AQ8TCU5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
GRIN3AQ8TCU5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.4■■□□□ 1.5
GRIN3AQ8TCU5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.4■■□□□ 1.5
GRIN3AQ8TCU5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
GRIN3AQ8TCU5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.4■■□□□ 1.5
GRIN3AQ8TCU5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.39■■□□□ 1.5
GRIN3AQ8TCU5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.39■■□□□ 1.5
GRIN3AQ8TCU5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
GRIN3AQ8TCU5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
GRIN3AQ8TCU5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
GRIN3AQ8TCU5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
GRIN3AQ8TCU5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
GRIN3AQ8TCU5 RARRES2P1-201ENST00000474487 481 ntBASIC24.39■■□□□ 1.49
GRIN3AQ8TCU5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.39■■□□□ 1.49
GRIN3AQ8TCU5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.38■■□□□ 1.49
GRIN3AQ8TCU5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
GRIN3AQ8TCU5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
GRIN3AQ8TCU5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
GRIN3AQ8TCU5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
GRIN3AQ8TCU5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.36■■□□□ 1.49
GRIN3AQ8TCU5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.36■■□□□ 1.49
GRIN3AQ8TCU5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.36■■□□□ 1.49
GRIN3AQ8TCU5 KRT8P33-201ENST00000508125 1423 ntBASIC24.35■■□□□ 1.49
GRIN3AQ8TCU5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
GRIN3AQ8TCU5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
GRIN3AQ8TCU5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
GRIN3AQ8TCU5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
GRIN3AQ8TCU5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
GRIN3AQ8TCU5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
GRIN3AQ8TCU5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.33■■□□□ 1.49
GRIN3AQ8TCU5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.33■■□□□ 1.49
GRIN3AQ8TCU5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.33■■□□□ 1.49
GRIN3AQ8TCU5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
GRIN3AQ8TCU5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
GRIN3AQ8TCU5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
GRIN3AQ8TCU5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
GRIN3AQ8TCU5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.32■■□□□ 1.48
GRIN3AQ8TCU5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms