Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
DENND4AQ7Z401 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.22■■□□□ 1.63
DENND4AQ7Z401 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
DENND4AQ7Z401 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
DENND4AQ7Z401 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DENND4AQ7Z401 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
DENND4AQ7Z401 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
DENND4AQ7Z401 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.21■■□□□ 1.63
DENND4AQ7Z401 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.21■■□□□ 1.63
DENND4AQ7Z401 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
DENND4AQ7Z401 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
DENND4AQ7Z401 KRT18P10-201ENST00000388836 1287 ntBASIC25.2■■□□□ 1.62
DENND4AQ7Z401 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
DENND4AQ7Z401 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.19■■□□□ 1.62
DENND4AQ7Z401 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.19■■□□□ 1.62
DENND4AQ7Z401 AC021242.3-201ENST00000607598 1377 ntBASIC25.19■■□□□ 1.62
DENND4AQ7Z401 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DENND4AQ7Z401 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DENND4AQ7Z401 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.19■■□□□ 1.62
DENND4AQ7Z401 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DENND4AQ7Z401 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
DENND4AQ7Z401 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DENND4AQ7Z401 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.18■■□□□ 1.62
DENND4AQ7Z401 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.18■■□□□ 1.62
DENND4AQ7Z401 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DENND4AQ7Z401 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DENND4AQ7Z401 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
DENND4AQ7Z401 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 AL449106.1-201ENST00000608517 1980 ntBASIC25.15■■□□□ 1.62
DENND4AQ7Z401 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DENND4AQ7Z401 DRD5P2-201ENST00000421395 2012 ntBASIC25.15■■□□□ 1.62
DENND4AQ7Z401 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.14■■□□□ 1.62
DENND4AQ7Z401 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DENND4AQ7Z401 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
DENND4AQ7Z401 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DENND4AQ7Z401 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.13■■□□□ 1.61
DENND4AQ7Z401 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DENND4AQ7Z401 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DENND4AQ7Z401 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DENND4AQ7Z401 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 AC110285.6-201ENST00000617652 491 ntBASIC25.11■■□□□ 1.61
DENND4AQ7Z401 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.11■■□□□ 1.61
DENND4AQ7Z401 AL117332.1-201ENST00000622628 974 ntBASIC25.11■■□□□ 1.61
DENND4AQ7Z401 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DENND4AQ7Z401 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
DENND4AQ7Z401 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.1■■□□□ 1.61
DENND4AQ7Z401 AC120024.1-201ENST00000562672 995 ntBASIC25.1■■□□□ 1.61
DENND4AQ7Z401 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.1■■□□□ 1.61
DENND4AQ7Z401 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.1■■□□□ 1.61
DENND4AQ7Z401 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DENND4AQ7Z401 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DENND4AQ7Z401 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
DENND4AQ7Z401 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DENND4AQ7Z401 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DENND4AQ7Z401 TSPY9P-201ENST00000440215 945 ntBASIC25.09■■□□□ 1.61
DENND4AQ7Z401 TSPY11P-201ENST00000442607 1045 ntBASIC25.09■■□□□ 1.61
DENND4AQ7Z401 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.09■■□□□ 1.61
DENND4AQ7Z401 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.08■■□□□ 1.61
DENND4AQ7Z401 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
DENND4AQ7Z401 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.08■■□□□ 1.61
DENND4AQ7Z401 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
DENND4AQ7Z401 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DENND4AQ7Z401 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DENND4AQ7Z401 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.07■■□□□ 1.6
DENND4AQ7Z401 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DENND4AQ7Z401 AC092028.1-203ENST00000608262 953 ntBASIC25.07■■□□□ 1.6
DENND4AQ7Z401 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DENND4AQ7Z401 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
DENND4AQ7Z401 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms