Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX8Q7RTT4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 AC103834.1-201ENST00000520383 144 ntBASIC20.84■□□□□ 0.93
SSX8Q7RTT4 PVT1_1.1-201ENST00000615125 194 ntBASIC20.84■□□□□ 0.93
SSX8Q7RTT4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SSX8Q7RTT4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.83■□□□□ 0.93
SSX8Q7RTT4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SSX8Q7RTT4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.83■□□□□ 0.93
SSX8Q7RTT4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSX8Q7RTT4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSX8Q7RTT4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSX8Q7RTT4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 KRT8P33-201ENST00000508125 1423 ntBASIC20.82■□□□□ 0.92
SSX8Q7RTT4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 AL031848.2-201ENST00000607670 837 ntBASIC20.82■□□□□ 0.92
SSX8Q7RTT4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SSX8Q7RTT4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 AL035685.1-201ENST00000636663 812 ntBASIC20.81■□□□□ 0.92
SSX8Q7RTT4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.81■□□□□ 0.92
SSX8Q7RTT4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSX8Q7RTT4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.8■□□□□ 0.92
SSX8Q7RTT4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSX8Q7RTT4 AL592295.1-201ENST00000400984 884 ntBASIC20.8■□□□□ 0.92
SSX8Q7RTT4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SSX8Q7RTT4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.79■□□□□ 0.92
SSX8Q7RTT4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SSX8Q7RTT4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSX8Q7RTT4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.78■□□□□ 0.92
SSX8Q7RTT4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX8Q7RTT4 AC103724.3-201ENST00000564481 992 ntBASIC20.78■□□□□ 0.92
SSX8Q7RTT4 AL451085.2-201ENST00000605085 799 ntBASIC20.78■□□□□ 0.92
SSX8Q7RTT4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSX8Q7RTT4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SSX8Q7RTT4 KRT18P24-201ENST00000344739 1156 ntBASIC20.77■□□□□ 0.92
SSX8Q7RTT4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.77■□□□□ 0.92
SSX8Q7RTT4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.77■□□□□ 0.91
SSX8Q7RTT4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SSX8Q7RTT4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
SSX8Q7RTT4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SSX8Q7RTT4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.75■□□□□ 0.91
SSX8Q7RTT4 Z92544.1-202ENST00000571933 1220 ntBASIC20.75■□□□□ 0.91
SSX8Q7RTT4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSX8Q7RTT4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSX8Q7RTT4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSX8Q7RTT4 AC009299.2-201ENST00000482477 511 ntBASIC20.74■□□□□ 0.91
SSX8Q7RTT4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.74■□□□□ 0.91
SSX8Q7RTT4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.74■□□□□ 0.91
SSX8Q7RTT4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX8Q7RTT4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSX8Q7RTT4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX8Q7RTT4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.73■□□□□ 0.91
SSX8Q7RTT4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms