Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF13O43567 AC010501.1-201ENST00000606270 1962 ntBASIC21.77■■□□□ 1.08
RNF13O43567 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.77■■□□□ 1.07
RNF13O43567 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RNF13O43567 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF13O43567 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF13O43567 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF13O43567 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF13O43567 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF13O43567 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF13O43567 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF13O43567 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF13O43567 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF13O43567 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF13O43567 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF13O43567 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF13O43567 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF13O43567 AL157400.5-201ENST00000507624 621 ntBASIC21.74■■□□□ 1.07
RNF13O43567 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF13O43567 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF13O43567 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF13O43567 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF13O43567 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF13O43567 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF13O43567 AC022413.1-201ENST00000624602 984 ntBASIC21.73■■□□□ 1.07
RNF13O43567 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF13O43567 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF13O43567 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF13O43567 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF13O43567 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.72■■□□□ 1.07
RNF13O43567 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF13O43567 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF13O43567 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF13O43567 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF13O43567 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF13O43567 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
RNF13O43567 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF13O43567 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF13O43567 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF13O43567 MIR4449-201ENST00000578365 66 ntBASIC21.71■■□□□ 1.07
RNF13O43567 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF13O43567 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF13O43567 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF13O43567 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF13O43567 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF13O43567 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RNF13O43567 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF13O43567 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF13O43567 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF13O43567 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF13O43567 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF13O43567 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF13O43567 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF13O43567 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF13O43567 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF13O43567 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF13O43567 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF13O43567 SMPD5-203ENST00000639008 1464 ntBASIC21.68■■□□□ 1.06
RNF13O43567 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF13O43567 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF13O43567 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF13O43567 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF13O43567 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF13O43567 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF13O43567 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF13O43567 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF13O43567 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF13O43567 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF13O43567 AC092296.2-201ENST00000589470 999 ntBASIC21.67■■□□□ 1.06
RNF13O43567 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF13O43567 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF13O43567 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF13O43567 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF13O43567 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF13O43567 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF13O43567 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF13O43567 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF13O43567 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF13O43567 AC025884.2-201ENST00000553429 711 ntBASIC21.66■■□□□ 1.06
RNF13O43567 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RNF13O43567 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF13O43567 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF13O43567 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF13O43567 MIR3960-201ENST00000583311 91 ntBASIC21.65■■□□□ 1.06
RNF13O43567 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF13O43567 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF13O43567 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF13O43567 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF13O43567 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF13O43567 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF13O43567 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF13O43567 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF13O43567 ECEL1P2-201ENST00000461596 1295 ntBASIC21.63■■□□□ 1.05
RNF13O43567 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms