Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV20-1A0A075B6N2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBV20-1A0A075B6N2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 AC100797.4-201ENST00000631653 1827 ntBASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV20-1A0A075B6N2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV20-1A0A075B6N2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV20-1A0A075B6N2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 LINC01124-201ENST00000409786 2117 ntBASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV20-1A0A075B6N2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV20-1A0A075B6N2 LINC00565-201ENST00000562710 2331 ntBASIC16.02■□□□□ 0.16
TRBV20-1A0A075B6N2 RNF165-205ENST00000588679 2904 ntBASIC16.02■□□□□ 0.16
TRBV20-1A0A075B6N2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV20-1A0A075B6N2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV20-1A0A075B6N2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBV20-1A0A075B6N2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRBV20-1A0A075B6N2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV20-1A0A075B6N2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV20-1A0A075B6N2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV20-1A0A075B6N2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV20-1A0A075B6N2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV20-1A0A075B6N2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 EED-207ENST00000528180 1745 ntTSL 5 BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV20-1A0A075B6N2 SLC25A24-204ENST00000569674 2357 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms