Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRBV20-1A0A075B6N2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TRBV20-1A0A075B6N2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TRBV20-1A0A075B6N2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV20-1A0A075B6N2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV20-1A0A075B6N2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.32■■□□□ 1.16
TRBV20-1A0A075B6N2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.16■■□□□ 1.14
TRBV20-1A0A075B6N2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRBV20-1A0A075B6N2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRBV20-1A0A075B6N2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TRBV20-1A0A075B6N2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV20-1A0A075B6N2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV20-1A0A075B6N2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV20-1A0A075B6N2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV20-1A0A075B6N2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.52■■□□□ 1.03
TRBV20-1A0A075B6N2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV20-1A0A075B6N2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV20-1A0A075B6N2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
TRBV20-1A0A075B6N2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV20-1A0A075B6N2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21■□□□□ 0.95
TRBV20-1A0A075B6N2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV20-1A0A075B6N2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV20-1A0A075B6N2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TRBV20-1A0A075B6N2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRBV20-1A0A075B6N2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
TRBV20-1A0A075B6N2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV20-1A0A075B6N2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV20-1A0A075B6N2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV20-1A0A075B6N2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRBV20-1A0A075B6N2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV20-1A0A075B6N2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV20-1A0A075B6N2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV20-1A0A075B6N2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRBV20-1A0A075B6N2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV20-1A0A075B6N2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TRBV20-1A0A075B6N2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV20-1A0A075B6N2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV20-1A0A075B6N2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV20-1A0A075B6N2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV20-1A0A075B6N2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV20-1A0A075B6N2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV20-1A0A075B6N2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV20-1A0A075B6N2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV20-1A0A075B6N2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV20-1A0A075B6N2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV20-1A0A075B6N2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV20-1A0A075B6N2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV20-1A0A075B6N2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV20-1A0A075B6N2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV20-1A0A075B6N2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV20-1A0A075B6N2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV20-1A0A075B6N2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV20-1A0A075B6N2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRBV20-1A0A075B6N2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV20-1A0A075B6N2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRBV20-1A0A075B6N2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRBV20-1A0A075B6N2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV20-1A0A075B6N2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.13■□□□□ 0.81
TRBV20-1A0A075B6N2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV20-1A0A075B6N2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV20-1A0A075B6N2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV20-1A0A075B6N2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV20-1A0A075B6N2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV20-1A0A075B6N2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRBV20-1A0A075B6N2 AL356512.1-201ENST00000607453 1739 ntBASIC20.07■□□□□ 0.8
TRBV20-1A0A075B6N2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV20-1A0A075B6N2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV20-1A0A075B6N2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV20-1A0A075B6N2 AL161658.1-201ENST00000623641 1967 ntBASIC20■□□□□ 0.79
TRBV20-1A0A075B6N2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV20-1A0A075B6N2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRBV20-1A0A075B6N2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV20-1A0A075B6N2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
TRBV20-1A0A075B6N2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV20-1A0A075B6N2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV20-1A0A075B6N2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRBV20-1A0A075B6N2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV20-1A0A075B6N2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.87■□□□□ 0.77
TRBV20-1A0A075B6N2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TRBV20-1A0A075B6N2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV20-1A0A075B6N2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV20-1A0A075B6N2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRBV20-1A0A075B6N2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV20-1A0A075B6N2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRBV20-1A0A075B6N2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV20-1A0A075B6N2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV20-1A0A075B6N2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV20-1A0A075B6N2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV20-1A0A075B6N2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV20-1A0A075B6N2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV20-1A0A075B6N2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV20-1A0A075B6N2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV20-1A0A075B6N2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV20-1A0A075B6N2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV20-1A0A075B6N2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV20-1A0A075B6N2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV20-1A0A075B6N2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV20-1A0A075B6N2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
TRBV20-1A0A075B6N2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV20-1A0A075B6N2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms