RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
PHOX2B-201ENST00000226382 SHROOM4Q9ULL8 1493 aa35.84■■■■□ 3.33
PHOX2B-201ENST00000226382 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
PHOX2B-201ENST00000226382 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
PHOX2B-201ENST00000226382 PCGF6Q9BYE7 350 aa34.44■■■■□ 3.1
PHOX2B-201ENST00000226382 HRCP23327 699 aa34.42■■■■□ 3.1
PHOX2B-201ENST00000226382 MYO15BQ96JP2 1530 aa34.31■■■■□ 3.08
PHOX2B-201ENST00000226382 CHIC1Q5VXU3 224 aa34.28■■■■□ 3.08
PHOX2B-201ENST00000226382 PPARGC1BQ86YN6 1023 aaKnown RBP34.27■■■■□ 3.08
PHOX2B-201ENST00000226382 PELP1Q8IZL8 1130 aaKnown RBP33.95■■■■□ 3.03
PHOX2B-201ENST00000226382 LOC105371045A0A1W2PR82 267 aa33.81■■■■□ 3
PHOX2B-201ENST00000226382 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
PHOX2B-201ENST00000226382 EHMT2Q96KQ7 1210 aa33.19■■■□□ 2.9
PHOX2B-201ENST00000226382 TRIM26Q12899 539 aaPredicted RBP33.06■■■□□ 2.88
PHOX2B-201ENST00000226382 MYT1Q01538 1121 aa33.05■■■□□ 2.88
PHOX2B-201ENST00000226382 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
PHOX2B-201ENST00000226382 FAM9AQ8IZU1 332 aaPredicted RBP32.99■■■□□ 2.87
PHOX2B-201ENST00000226382 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
PHOX2B-201ENST00000226382 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
PHOX2B-201ENST00000226382 SCAF1Q9H7N4 1312 aaKnown RBP32.43■■■□□ 2.78
PHOX2B-201ENST00000226382 ZEB1P37275 1124 aaPredicted RBP32.38■■■□□ 2.77
PHOX2B-201ENST00000226382 TTBK1Q5TCY1 1321 aaPredicted RBP32.2■■■□□ 2.75
PHOX2B-201ENST00000226382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.15■■■□□ 2.74
PHOX2B-201ENST00000226382 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
PHOX2B-201ENST00000226382 SCRIBQ14160 1630 aa31.98■■■□□ 2.71
PHOX2B-201ENST00000226382 CCER1Q8TC90 406 aaPredicted RBP31.97■■■□□ 2.71
PHOX2B-201ENST00000226382 ABCC9O60706 1549 aa31.93■■■□□ 2.7
PHOX2B-201ENST00000226382 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
PHOX2B-201ENST00000226382 NEUROD1Q13562 356 aa31.82■■■□□ 2.68
PHOX2B-201ENST00000226382 ACIN1Q9UKV3 1341 aaKnown RBP31.68■■■□□ 2.66
PHOX2B-201ENST00000226382 GTF3C3Q9Y5Q9 886 aa31.63■■■□□ 2.65
PHOX2B-201ENST00000226382 DIEXFQ68CQ4 756 aaKnown RBP31.6■■■□□ 2.65
PHOX2B-201ENST00000226382 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
PHOX2B-201ENST00000226382 YTHDC1Q96MU7 727 aaKnown RBP31.48■■■□□ 2.63
PHOX2B-201ENST00000226382 CENPBP07199 599 aaPredicted RBP31.37■■■□□ 2.61
PHOX2B-201ENST00000226382 MROH2BQ7Z745 1585 aa31.31■■■□□ 2.6
PHOX2B-201ENST00000226382 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
PHOX2B-201ENST00000226382 WIZO95785 1651 aa31.16■■■□□ 2.58
PHOX2B-201ENST00000226382 HNRNPUL2Q1KMD3 747 aaKnown RBP31.07■■■□□ 2.56
PHOX2B-201ENST00000226382 RANGAP1P46060 587 aaPredicted RBP31■■■□□ 2.55
PHOX2B-201ENST00000226382 ABCC8Q09428 1581 aa30.99■■■□□ 2.55
PHOX2B-201ENST00000226382 ZNF316A6NFI3 1004 aaPredicted RBP30.99■■■□□ 2.55
PHOX2B-201ENST00000226382 PRKCSHP14314 528 aaPredicted RBP30.97■■■□□ 2.55
PHOX2B-201ENST00000226382 BCL11AQ9H165 835 aa30.97■■■□□ 2.55
PHOX2B-201ENST00000226382 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
PHOX2B-201ENST00000226382 CEP162Q5TB80 1403 aa30.95■■■□□ 2.55
PHOX2B-201ENST00000226382 SOGA1O94964 1423 aa30.92■■■□□ 2.54
PHOX2B-201ENST00000226382 MIER1Q8N108 512 aa30.91■■■□□ 2.54
PHOX2B-201ENST00000226382 CSRNP3Q8WYN3 585 aa30.77■■■□□ 2.52
PHOX2B-201ENST00000226382 RUSC2Q8N2Y8 1516 aa30.76■■■□□ 2.51
PHOX2B-201ENST00000226382 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
PHOX2B-201ENST00000226382 TNIKQ9UKE5 1360 aa30.61■■■□□ 2.49
PHOX2B-201ENST00000226382 BAZ1AQ9NRL2 1556 aaPredicted RBP30.61■■■□□ 2.49
PHOX2B-201ENST00000226382 NACADO15069 1562 aa30.57■■■□□ 2.48
PHOX2B-201ENST00000226382 EIF4G1Q04637 1599 aaKnown RBP30.51■■■□□ 2.47
PHOX2B-201ENST00000226382 APLP2Q06481 763 aa30.48■■■□□ 2.47
PHOX2B-201ENST00000226382 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
PHOX2B-201ENST00000226382 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
PHOX2B-201ENST00000226382 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
PHOX2B-201ENST00000226382 SMARCA2P51531 1590 aa30.31■■■□□ 2.44
PHOX2B-201ENST00000226382 CLIP1P30622 1438 aa30.25■■■□□ 2.43
PHOX2B-201ENST00000226382 ITGAEP38570 1179 aa30.18■■■□□ 2.42
PHOX2B-201ENST00000226382 SMARCA4P51532 1647 aa30.16■■■□□ 2.42
PHOX2B-201ENST00000226382 EEA1Q15075 1411 aa30.15■■■□□ 2.42
PHOX2B-201ENST00000226382 ERICH6Q7L0X2 663 aa30.12■■■□□ 2.41
PHOX2B-201ENST00000226382 SUPT16HQ9Y5B9 1047 aaKnown RBP30.08■■■□□ 2.41
PHOX2B-201ENST00000226382 BCANQ96GW7 911 aa30.02■■■□□ 2.4
PHOX2B-201ENST00000226382 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.39
PHOX2B-201ENST00000226382 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
PHOX2B-201ENST00000226382 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
PHOX2B-201ENST00000226382 KCNH8Q96L42 1107 aa29.99■■■□□ 2.39
PHOX2B-201ENST00000226382 KANK4Q5T7N3 995 aaPredicted RBP29.97■■■□□ 2.39
PHOX2B-201ENST00000226382 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
PHOX2B-201ENST00000226382 DHX57Q6P158 1386 aaKnown RBP29.87■■■□□ 2.37
PHOX2B-201ENST00000226382 ANP32EQ9BTT0 268 aa29.84■■■□□ 2.37
PHOX2B-201ENST00000226382 TSHZ2Q9NRE2 1034 aa29.79■■■□□ 2.36
PHOX2B-201ENST00000226382 KIF21BO75037 1637 aa29.75■■■□□ 2.35
PHOX2B-201ENST00000226382 HIRIP3Q9BW71 556 aaPredicted RBP29.71■■■□□ 2.35
PHOX2B-201ENST00000226382 DDX10Q13206 875 aaKnown RBP29.64■■■□□ 2.34
PHOX2B-201ENST00000226382 FKBP8Q14318 412 aa29.61■■■□□ 2.33
PHOX2B-201ENST00000226382 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
PHOX2B-201ENST00000226382 ATP1B4Q9UN42 357 aaPredicted RBP29.55■■■□□ 2.32
PHOX2B-201ENST00000226382 CLSPNQ9HAW4 1339 aa29.54■■■□□ 2.32
PHOX2B-201ENST00000226382 SIN3AQ96ST3 1273 aa29.53■■■□□ 2.32
PHOX2B-201ENST00000226382 BAZ1BQ9UIG0 1483 aaKnown RBP29.52■■■□□ 2.32
PHOX2B-201ENST00000226382 TRIM52Q96A61 297 aa29.51■■■□□ 2.32
PHOX2B-201ENST00000226382 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
PHOX2B-201ENST00000226382 FAM50AQ14320 339 aaKnown RBP29.45■■■□□ 2.31
PHOX2B-201ENST00000226382 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
PHOX2B-201ENST00000226382 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
PHOX2B-201ENST00000226382 P3H3Q8IVL6 736 aa29.39■■■□□ 2.3
PHOX2B-201ENST00000226382 RAB3GAP2Q9H2M9 1393 aa29.38■■■□□ 2.29
PHOX2B-201ENST00000226382 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
PHOX2B-201ENST00000226382 NEFLP07196 543 aa29.29■■■□□ 2.28
PHOX2B-201ENST00000226382 RRBP1Q9P2E9 1410 aaKnown RBP29.26■■■□□ 2.27
PHOX2B-201ENST00000226382 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
PHOX2B-201ENST00000226382 IRX6P78412 446 aaPredicted RBP29.21■■■□□ 2.27
PHOX2B-201ENST00000226382 RBM19Q9Y4C8 960 aaKnown RBP29.18■■■□□ 2.26
PHOX2B-201ENST00000226382 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
PHOX2B-201ENST00000226382 ARHGAP35Q9NRY4 1499 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms