Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 MIR718-201ENST00000390190 70 ntBASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 EGLN1P1-201ENST00000531623 762 ntBASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CNIH3Q8TBE1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC008550.1-201ENST00000511500 884 ntBASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AL136038.4-201ENST00000603606 1261 ntBASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.54■□□□□ 0.08
CNIH3Q8TBE1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AL596087.1-201ENST00000400979 1969 ntBASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 LINC02228-204ENST00000642115 2962 ntBASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AC097374.2-201ENST00000618617 1306 ntBASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms