RNA–Protein interactions for RNA: ENST00000395461.7

LAT-204, Transcript of linker for activation of T cells, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAT, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAT-204ENST00000395461 NISCHQ9Y2I1 1504 aa44.16■■■■■ 4.66
LAT-204ENST00000395461 CCDC180Q9P1Z9 1646 aa39.09■■■■□ 3.85
LAT-204ENST00000395461 ABCC9O60706 1549 aa38.32■■■■□ 3.73
LAT-204ENST00000395461 DCAF8L2P0C7V8 631 aa37.1■■■■□ 3.53
LAT-204ENST00000395461 RB1CC1Q8TDY2 1594 aa36.8■■■■□ 3.48
LAT-204ENST00000395461 NACADO15069 1562 aa36.77■■■■□ 3.48
LAT-204ENST00000395461 ZCCHC6Q5VYS8 1495 aaKnown RBP36.77■■■■□ 3.48
LAT-204ENST00000395461 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
LAT-204ENST00000395461 DCAF1Q9Y4B6 1507 aa36.45■■■■□ 3.43
LAT-204ENST00000395461 UNC13AQ9UPW8 1703 aa35.96■■■■□ 3.35
LAT-204ENST00000395461 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
LAT-204ENST00000395461 SCRIBQ14160 1630 aa35.82■■■■□ 3.32
LAT-204ENST00000395461 BICRAQ9NZM4 1560 aa35.71■■■■□ 3.31
LAT-204ENST00000395461 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
LAT-204ENST00000395461 DNAJC5BQ9UF47 199 aa35.14■■■■□ 3.22
LAT-204ENST00000395461 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
LAT-204ENST00000395461 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
LAT-204ENST00000395461 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
LAT-204ENST00000395461 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
LAT-204ENST00000395461 BAZ1AQ9NRL2 1556 aaPredicted RBP34.19■■■■□ 3.06
LAT-204ENST00000395461 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
LAT-204ENST00000395461 ATAD2BQ9ULI0 1458 aa34.03■■■■□ 3.04
LAT-204ENST00000395461 NCAPD3P42695 1498 aa33.97■■■■□ 3.03
LAT-204ENST00000395461 SMARCA2P51531 1590 aa33.96■■■■□ 3.03
LAT-204ENST00000395461 PEG3Q9GZU2 1588 aa33.82■■■■□ 3
LAT-204ENST00000395461 BAZ1BQ9UIG0 1483 aaKnown RBP33.77■■■■□ 3
LAT-204ENST00000395461 HMGXB3Q12766 1538 aa33.76■■■□□ 2.99
LAT-204ENST00000395461 RSF1Q96T23 1441 aaPredicted RBP33.74■■■□□ 2.99
LAT-204ENST00000395461 WIZO95785 1651 aa33.71■■■□□ 2.99
LAT-204ENST00000395461 TOP2AP11388 1531 aaKnown RBP33.3■■■□□ 2.92
LAT-204ENST00000395461 NESP48681 1621 aa33.21■■■□□ 2.91
LAT-204ENST00000395461 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
LAT-204ENST00000395461 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
LAT-204ENST00000395461 LAMC3Q9Y6N6 1575 aa33.01■■■□□ 2.88
LAT-204ENST00000395461 ERCC6Q03468 1493 aa33■■■□□ 2.87
LAT-204ENST00000395461 CCDC88BA6NC98 1476 aa32.99■■■□□ 2.87
LAT-204ENST00000395461 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
LAT-204ENST00000395461 CFTRP13569 1480 aa32.82■■■□□ 2.85
LAT-204ENST00000395461 KIF21AQ7Z4S6 1674 aa32.73■■■□□ 2.83
LAT-204ENST00000395461 FANCD2Q9BXW9 1451 aa32.65■■■□□ 2.82
LAT-204ENST00000395461 CEP164Q9UPV0 1460 aa32.57■■■□□ 2.8
LAT-204ENST00000395461 THOC2Q8NI27 1593 aaKnown RBP32.55■■■□□ 2.8
LAT-204ENST00000395461 CUX2O14529 1486 aa32.51■■■□□ 2.8
LAT-204ENST00000395461 MRC2Q9UBG0 1479 aa32.49■■■□□ 2.79
LAT-204ENST00000395461 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
LAT-204ENST00000395461 WDR62O43379 1518 aa32.34■■■□□ 2.77
LAT-204ENST00000395461 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
LAT-204ENST00000395461 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
LAT-204ENST00000395461 ABCC8Q09428 1581 aa32.09■■■□□ 2.73
LAT-204ENST00000395461 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
LAT-204ENST00000395461 CUX1P39880 1505 aa31.94■■■□□ 2.7
LAT-204ENST00000395461 IFT140Q96RY7 1462 aa31.88■■■□□ 2.69
LAT-204ENST00000395461 POLA1P09884 1462 aaPredicted RBP31.86■■■□□ 2.69
LAT-204ENST00000395461 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
LAT-204ENST00000395461 WRNQ14191 1432 aaPredicted RBP eCLIP31.8■■■□□ 2.68
LAT-204ENST00000395461 SOGA1O94964 1423 aa31.79■■■□□ 2.68
LAT-204ENST00000395461 RAD54L2Q9Y4B4 1467 aa31.79■■■□□ 2.68
LAT-204ENST00000395461 ZNF608Q9ULD9 1512 aaPredicted RBP31.79■■■□□ 2.68
LAT-204ENST00000395461 TARBP1Q13395 1621 aaKnown RBP31.74■■■□□ 2.67
LAT-204ENST00000395461 SYNJ1O43426 1573 aa31.7■■■□□ 2.66
LAT-204ENST00000395461 TOP2BQ02880 1626 aa31.65■■■□□ 2.66
LAT-204ENST00000395461 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.66
LAT-204ENST00000395461 TDRD9Q8NDG6 1382 aaKnown RBP31.64■■■□□ 2.65
LAT-204ENST00000395461 BIVM-ERCC5R4GMW8 1640 aa31.63■■■□□ 2.65
LAT-204ENST00000395461 EIF4G3O43432 1585 aaKnown RBP31.59■■■□□ 2.65
LAT-204ENST00000395461 DNAJC5Q9H3Z4 198 aa31.49■■■□□ 2.63
LAT-204ENST00000395461 ABCA10Q8WWZ4 1543 aa31.48■■■□□ 2.63
LAT-204ENST00000395461 WDR97A6NE52 1622 aa31.45■■■□□ 2.63
LAT-204ENST00000395461 GAPVD1Q14C86 1478 aa31.39■■■□□ 2.62
LAT-204ENST00000395461 GRIN2BQ13224 1484 aa31.35■■■□□ 2.61
LAT-204ENST00000395461 FBLN2P98095 1184 aa31.33■■■□□ 2.61
LAT-204ENST00000395461 OSCARQ8IYS5 282 aa31.33■■■□□ 2.61
LAT-204ENST00000395461 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
LAT-204ENST00000395461 SNAPC4Q5SXM2 1469 aa31.31■■■□□ 2.6
LAT-204ENST00000395461 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
LAT-204ENST00000395461 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
LAT-204ENST00000395461 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
LAT-204ENST00000395461 CHMP7Q8WUX9 453 aaPredicted RBP31.21■■■□□ 2.59
LAT-204ENST00000395461 CHD1O14646 1710 aa31.18■■■□□ 2.58
LAT-204ENST00000395461 KIF27Q86VH2 1401 aa31.12■■■□□ 2.57
LAT-204ENST00000395461 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
LAT-204ENST00000395461 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
LAT-204ENST00000395461 IGF1RP08069 1367 aa31.02■■■□□ 2.56
LAT-204ENST00000395461 FHAD1B1AJZ9 1412 aa31.01■■■□□ 2.56
LAT-204ENST00000395461 ADAMTS12P58397 1594 aa31.01■■■□□ 2.55
LAT-204ENST00000395461 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.54
LAT-204ENST00000395461 RUSC2Q8N2Y8 1516 aa30.95■■■□□ 2.54
LAT-204ENST00000395461 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
LAT-204ENST00000395461 CARMIL1Q5VZK9 1371 aa30.84■■■□□ 2.53
LAT-204ENST00000395461 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
LAT-204ENST00000395461 CUL7Q14999 1698 aa30.8■■■□□ 2.52
LAT-204ENST00000395461 CEP170Q5SW79 1584 aa30.78■■■□□ 2.52
LAT-204ENST00000395461 NUP160Q12769 1436 aa30.78■■■□□ 2.52
LAT-204ENST00000395461 ARHGEF11O15085 1522 aa30.73■■■□□ 2.51
LAT-204ENST00000395461 RIMBP3CA6NJZ7 1639 aa30.72■■■□□ 2.51
LAT-204ENST00000395461 RIMBP3BA6NNM3 1639 aa30.72■■■□□ 2.51
LAT-204ENST00000395461 RIMBP3Q9UFD9 1639 aa30.72■■■□□ 2.51
LAT-204ENST00000395461 FAM9AQ8IZU1 332 aaPredicted RBP30.68■■■□□ 2.5
LAT-204ENST00000395461 CSRNP3Q8WYN3 585 aa30.64■■■□□ 2.49
LAT-204ENST00000395461 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms