RNA–Protein interactions for RNA: ENST00000378345.8

ACSF3-202, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSF3, Length 1,541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-202ENST00000378345 NISCHQ9Y2I1 1504 aa45.28■■■■■ 4.84
ACSF3-202ENST00000378345 CCDC180Q9P1Z9 1646 aa40.44■■■■■ 4.06
ACSF3-202ENST00000378345 ABCC9O60706 1549 aa40.31■■■■■ 4.04
ACSF3-202ENST00000378345 RB1CC1Q8TDY2 1594 aa38.42■■■■□ 3.74
ACSF3-202ENST00000378345 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
ACSF3-202ENST00000378345 NACADO15069 1562 aa38.21■■■■□ 3.71
ACSF3-202ENST00000378345 MYO15BQ96JP2 1530 aa37.74■■■■□ 3.63
ACSF3-202ENST00000378345 PABPN1Q86U42 306 aaKnown RBP eCLIP37.62■■■■□ 3.61
ACSF3-202ENST00000378345 DNAJC5BQ9UF47 199 aa37.6■■■■□ 3.61
ACSF3-202ENST00000378345 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
ACSF3-202ENST00000378345 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
ACSF3-202ENST00000378345 DCAF1Q9Y4B6 1507 aa37.37■■■■□ 3.57
ACSF3-202ENST00000378345 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
ACSF3-202ENST00000378345 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
ACSF3-202ENST00000378345 SHROOM4Q9ULL8 1493 aa36.77■■■■□ 3.48
ACSF3-202ENST00000378345 CC2D2AQ9P2K1 1620 aa36.37■■■■□ 3.41
ACSF3-202ENST00000378345 EIF4G1Q04637 1599 aaKnown RBP36.37■■■■□ 3.41
ACSF3-202ENST00000378345 CECR2Q9BXF3 1484 aa36.27■■■■□ 3.4
ACSF3-202ENST00000378345 NCAPD3P42695 1498 aa35.3■■■■□ 3.24
ACSF3-202ENST00000378345 SMARCA4P51532 1647 aa35.25■■■■□ 3.23
ACSF3-202ENST00000378345 ATAD2BQ9ULI0 1458 aa35.25■■■■□ 3.23
ACSF3-202ENST00000378345 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
ACSF3-202ENST00000378345 BAZ1AQ9NRL2 1556 aaPredicted RBP35.12■■■■□ 3.21
ACSF3-202ENST00000378345 HMGXB3Q12766 1538 aa35.03■■■■□ 3.2
ACSF3-202ENST00000378345 BAZ1BQ9UIG0 1483 aaKnown RBP34.92■■■■□ 3.18
ACSF3-202ENST00000378345 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
ACSF3-202ENST00000378345 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
ACSF3-202ENST00000378345 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
ACSF3-202ENST00000378345 NESP48681 1621 aa34.7■■■■□ 3.15
ACSF3-202ENST00000378345 CUX2O14529 1486 aa34.57■■■■□ 3.12
ACSF3-202ENST00000378345 WIZO95785 1651 aa34.49■■■■□ 3.11
ACSF3-202ENST00000378345 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
ACSF3-202ENST00000378345 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
ACSF3-202ENST00000378345 DNAJC5Q9H3Z4 198 aa34.3■■■■□ 3.08
ACSF3-202ENST00000378345 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
ACSF3-202ENST00000378345 CADPSQ9ULU8 1353 aa34.27■■■■□ 3.08
ACSF3-202ENST00000378345 THOC2Q8NI27 1593 aaKnown RBP34.23■■■■□ 3.07
ACSF3-202ENST00000378345 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
ACSF3-202ENST00000378345 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.04
ACSF3-202ENST00000378345 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.03
ACSF3-202ENST00000378345 CFTRP13569 1480 aa33.91■■■■□ 3.02
ACSF3-202ENST00000378345 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
ACSF3-202ENST00000378345 CEP164Q9UPV0 1460 aa33.87■■■■□ 3.01
ACSF3-202ENST00000378345 WDR62O43379 1518 aa33.83■■■■□ 3.01
ACSF3-202ENST00000378345 CCDC88BA6NC98 1476 aa33.71■■■□□ 2.99
ACSF3-202ENST00000378345 URB2Q14146 1524 aaKnown RBP33.57■■■□□ 2.97
ACSF3-202ENST00000378345 PRDM2Q13029 1718 aa33.49■■■□□ 2.95
ACSF3-202ENST00000378345 TOPBP1Q92547 1522 aa33.25■■■□□ 2.91
ACSF3-202ENST00000378345 IFT140Q96RY7 1462 aa33.19■■■□□ 2.9
ACSF3-202ENST00000378345 ABCC8Q09428 1581 aa33.16■■■□□ 2.9
ACSF3-202ENST00000378345 ZNF608Q9ULD9 1512 aaPredicted RBP33.14■■■□□ 2.9
ACSF3-202ENST00000378345 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
ACSF3-202ENST00000378345 OSCARQ8IYS5 282 aa33.1■■■□□ 2.89
ACSF3-202ENST00000378345 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.89
ACSF3-202ENST00000378345 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
ACSF3-202ENST00000378345 POLA1P09884 1462 aaPredicted RBP32.93■■■□□ 2.86
ACSF3-202ENST00000378345 EIF4G3O43432 1585 aaKnown RBP32.92■■■□□ 2.86
ACSF3-202ENST00000378345 TARBP1Q13395 1621 aaKnown RBP32.9■■■□□ 2.86
ACSF3-202ENST00000378345 AQRO60306 1485 aaKnown RBP eCLIP32.88■■■□□ 2.853e-6■■■■□ 25.2
ACSF3-202ENST00000378345 RAD54L2Q9Y4B4 1467 aa32.85■■■□□ 2.85
ACSF3-202ENST00000378345 SOGA1O94964 1423 aa32.81■■■□□ 2.84
ACSF3-202ENST00000378345 CUX1P39880 1505 aa32.78■■■□□ 2.84
ACSF3-202ENST00000378345 FGD5Q6ZNL6 1462 aa32.77■■■□□ 2.84
ACSF3-202ENST00000378345 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
ACSF3-202ENST00000378345 FBLN2P98095 1184 aa32.67■■■□□ 2.82
ACSF3-202ENST00000378345 CHD1O14646 1710 aa32.61■■■□□ 2.81
ACSF3-202ENST00000378345 RIMBP3CA6NJZ7 1639 aa32.59■■■□□ 2.81
ACSF3-202ENST00000378345 RIMBP3BA6NNM3 1639 aa32.59■■■□□ 2.81
ACSF3-202ENST00000378345 RIMBP3Q9UFD9 1639 aa32.59■■■□□ 2.81
ACSF3-202ENST00000378345 WDR97A6NE52 1622 aa32.54■■■□□ 2.8
ACSF3-202ENST00000378345 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
ACSF3-202ENST00000378345 ARHGEF11O15085 1522 aa32.53■■■□□ 2.8
ACSF3-202ENST00000378345 GRIN2BQ13224 1484 aa32.47■■■□□ 2.79
ACSF3-202ENST00000378345 CHMP7Q8WUX9 453 aaPredicted RBP32.43■■■□□ 2.78
ACSF3-202ENST00000378345 MAGI1Q96QZ7 1491 aaPredicted RBP32.43■■■□□ 2.78
ACSF3-202ENST00000378345 GAPVD1Q14C86 1478 aa32.41■■■□□ 2.78
ACSF3-202ENST00000378345 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
ACSF3-202ENST00000378345 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.77
ACSF3-202ENST00000378345 CYB5RLQ6IPT4 315 aa32.35■■■□□ 2.77
ACSF3-202ENST00000378345 SYNJ2O15056 1496 aa32.33■■■□□ 2.77
ACSF3-202ENST00000378345 PBRM1Q86U86 1689 aa32.32■■■□□ 2.76
ACSF3-202ENST00000378345 TOP2BQ02880 1626 aa32.3■■■□□ 2.76
ACSF3-202ENST00000378345 ABCA5Q8WWZ7 1642 aa32.3■■■□□ 2.76
ACSF3-202ENST00000378345 SYNJ1O43426 1573 aa32.3■■■□□ 2.76
ACSF3-202ENST00000378345 BIVM-ERCC5R4GMW8 1640 aa32.28■■■□□ 2.76
ACSF3-202ENST00000378345 CLASP1Q7Z460 1538 aa32.25■■■□□ 2.75
ACSF3-202ENST00000378345 ARAP1Q96P48 1450 aa32.24■■■□□ 2.75
ACSF3-202ENST00000378345 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
ACSF3-202ENST00000378345 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
ACSF3-202ENST00000378345 FHAD1B1AJZ9 1412 aa32■■■□□ 2.71
ACSF3-202ENST00000378345 ERICH3Q5RHP9 1530 aa31.98■■■□□ 2.71
ACSF3-202ENST00000378345 NUP160Q12769 1436 aa31.93■■■□□ 2.7
ACSF3-202ENST00000378345 CEP170Q5SW79 1584 aa31.92■■■□□ 2.7
ACSF3-202ENST00000378345 TRHP20396 242 aaPredicted RBP31.9■■■□□ 2.7
ACSF3-202ENST00000378345 ERCC6L2Q5T890 1561 aa31.82■■■□□ 2.68
ACSF3-202ENST00000378345 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
ACSF3-202ENST00000378345 SHROOM2Q13796 1616 aa31.72■■■□□ 2.67
ACSF3-202ENST00000378345 IGF1RP08069 1367 aa31.69■■■□□ 2.66
ACSF3-202ENST00000378345 JPH4Q96JJ6 628 aa31.65■■■□□ 2.66
ACSF3-202ENST00000378345 PRG4Q92954 1404 aaPredicted RBP31.64■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms