Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.84■□□□□ 0.45
RARAP10276 AC008608.2-201ENST00000606089 416 ntBASIC17.84■□□□□ 0.45
RARAP10276 AL353135.1-201ENST00000606729 504 ntBASIC17.84■□□□□ 0.45
RARAP10276 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RARAP10276 PCDHA1-201ENST00000378133 2726 ntBASIC17.84■□□□□ 0.45
RARAP10276 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RARAP10276 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RARAP10276 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RARAP10276 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RARAP10276 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RARAP10276 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RARAP10276 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RARAP10276 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RARAP10276 AL645728.1-201ENST00000366221 2101 ntBASIC17.83■□□□□ 0.45
RARAP10276 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
RARAP10276 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RARAP10276 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RARAP10276 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RARAP10276 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.83■□□□□ 0.44
RARAP10276 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RARAP10276 KRT18P56-201ENST00000507275 550 ntBASIC17.83■□□□□ 0.44
RARAP10276 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.83■□□□□ 0.44
RARAP10276 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.83■□□□□ 0.44
RARAP10276 SART3-203ENST00000546611 1184 ntBASIC17.83■□□□□ 0.44
RARAP10276 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.83■□□□□ 0.44
RARAP10276 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RARAP10276 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
RARAP10276 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.83■□□□□ 0.44
RARAP10276 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.83■□□□□ 0.44
RARAP10276 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RARAP10276 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RARAP10276 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RARAP10276 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 LINC02199-201ENST00000506655 2702 ntBASIC17.82■□□□□ 0.44
RARAP10276 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 AL590787.1-201ENST00000568856 1315 ntBASIC17.82■□□□□ 0.44
RARAP10276 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RARAP10276 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.82■□□□□ 0.44
RARAP10276 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RARAP10276 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 AF238378.1-201ENST00000526806 358 ntBASIC17.82■□□□□ 0.44
RARAP10276 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.82■□□□□ 0.44
RARAP10276 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.82■□□□□ 0.44
RARAP10276 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RARAP10276 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RARAP10276 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RARAP10276 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RARAP10276 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.82■□□□□ 0.44
RARAP10276 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RARAP10276 NCF1C-201ENST00000438382 1427 ntBASIC17.81■□□□□ 0.44
RARAP10276 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.81■□□□□ 0.44
RARAP10276 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RARAP10276 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.81■□□□□ 0.44
RARAP10276 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
RARAP10276 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.81■□□□□ 0.44
RARAP10276 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.81■□□□□ 0.44
RARAP10276 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.81■□□□□ 0.44
RARAP10276 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RARAP10276 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms