RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 PELP1Q8IZL8 1130 aaKnown RBP29.16■■■□□ 2.26
TRAK1-209ENST00000487159 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
TRAK1-209ENST00000487159 MYT1Q01538 1121 aa28.5■■■□□ 2.15
TRAK1-209ENST00000487159 ERICH6Q7L0X2 663 aa28.05■■■□□ 2.08
TRAK1-209ENST00000487159 CCER1Q8TC90 406 aaPredicted RBP27.75■■■□□ 2.03
TRAK1-209ENST00000487159 CENPBP07199 599 aaPredicted RBP27.67■■■□□ 2.02
TRAK1-209ENST00000487159 SUPT5HO00267 1087 aaKnown RBP27.61■■■□□ 2.01
TRAK1-209ENST00000487159 EHMT2Q96KQ7 1210 aa27.11■■□□□ 1.93
TRAK1-209ENST00000487159 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
TRAK1-209ENST00000487159 ZEB1P37275 1124 aaPredicted RBP26.97■■□□□ 1.91
TRAK1-209ENST00000487159 NEFLP07196 543 aa26.9■■□□□ 1.9
TRAK1-209ENST00000487159 APLP2Q06481 763 aa26.86■■□□□ 1.89
TRAK1-209ENST00000487159 TTBK1Q5TCY1 1321 aaPredicted RBP26.76■■□□□ 1.87
TRAK1-209ENST00000487159 YTHDC1Q96MU7 727 aaKnown RBP26.68■■□□□ 1.86
TRAK1-209ENST00000487159 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
TRAK1-209ENST00000487159 DAXXQ9UER7 740 aaPredicted RBP26.36■■□□□ 1.81
TRAK1-209ENST00000487159 FAM9AQ8IZU1 332 aaPredicted RBP26.19■■□□□ 1.78
TRAK1-209ENST00000487159 RTL5Q5HYW3 569 aaPredicted RBP26.13■■□□□ 1.77
TRAK1-209ENST00000487159 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
TRAK1-209ENST00000487159 HRCP23327 699 aa25.94■■□□□ 1.74
TRAK1-209ENST00000487159 ZNF316A6NFI3 1004 aaPredicted RBP25.7■■□□□ 1.7
TRAK1-209ENST00000487159 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
TRAK1-209ENST00000487159 TRIM26Q12899 539 aaPredicted RBP25.56■■□□□ 1.68
TRAK1-209ENST00000487159 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
TRAK1-209ENST00000487159 EIF5BO60841 1220 aaKnown RBP25.38■■□□□ 1.65
TRAK1-209ENST00000487159 ATP1B4Q9UN42 357 aaPredicted RBP25.37■■□□□ 1.65
TRAK1-209ENST00000487159 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
TRAK1-209ENST00000487159 CLSPNQ9HAW4 1339 aa25.33■■□□□ 1.65
TRAK1-209ENST00000487159 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
TRAK1-209ENST00000487159 GLIPR1L2Q4G1C9 344 aa25.29■■□□□ 1.64
TRAK1-209ENST00000487159 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
TRAK1-209ENST00000487159 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
TRAK1-209ENST00000487159 POLR3GLQ9BT43 218 aa25.16■■□□□ 1.62
TRAK1-209ENST00000487159 BCANQ96GW7 911 aa25.15■■□□□ 1.62
TRAK1-209ENST00000487159 CDK11AQ9UQ88 783 aaPredicted RBP25.14■■□□□ 1.62
TRAK1-209ENST00000487159 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
TRAK1-209ENST00000487159 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.57
TRAK1-209ENST00000487159 MYT1LQ9UL68 1186 aa24.82■■□□□ 1.56
TRAK1-209ENST00000487159 ANP32AP39687 249 aaKnown RBP24.82■■□□□ 1.56
TRAK1-209ENST00000487159 ITGAEP38570 1179 aa24.8■■□□□ 1.56
TRAK1-209ENST00000487159 HNRNPUL2Q1KMD3 747 aaKnown RBP24.77■■□□□ 1.56
TRAK1-209ENST00000487159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
TRAK1-209ENST00000487159 ANP32BQ92688 251 aaKnown RBP24.64■■□□□ 1.54
TRAK1-209ENST00000487159 NPM2Q86SE8 214 aaKnown RBP24.52■■□□□ 1.52
TRAK1-209ENST00000487159 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
TRAK1-209ENST00000487159 ZBTB47Q9UFB7 747 aaPredicted RBP24.49■■□□□ 1.51
TRAK1-209ENST00000487159 ANP32CO43423 234 aa24.49■■□□□ 1.51
TRAK1-209ENST00000487159 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
TRAK1-209ENST00000487159 NBR1Q14596 966 aa24.37■■□□□ 1.49
TRAK1-209ENST00000487159 FKBP8Q14318 412 aa24.26■■□□□ 1.47
TRAK1-209ENST00000487159 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
TRAK1-209ENST00000487159 TNNT2P45379 298 aaPredicted RBP24.2■■□□□ 1.47
TRAK1-209ENST00000487159 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
TRAK1-209ENST00000487159 HSP90AA1P07900 732 aaKnown RBP24.17■■□□□ 1.46
TRAK1-209ENST00000487159 BCL11AQ9H165 835 aa24.16■■□□□ 1.46
TRAK1-209ENST00000487159 NEUROD1Q13562 356 aa24.13■■□□□ 1.45
TRAK1-209ENST00000487159 ARXQ96QS3 562 aa24.12■■□□□ 1.45
TRAK1-209ENST00000487159 ANP32EQ9BTT0 268 aa24.08■■□□□ 1.45
TRAK1-209ENST00000487159 UPF2Q9HAU5 1272 aaKnown RBP24.07■■□□□ 1.44
TRAK1-209ENST00000487159 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
TRAK1-209ENST00000487159 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
TRAK1-209ENST00000487159 FAM50AQ14320 339 aaKnown RBP23.91■■□□□ 1.42
TRAK1-209ENST00000487159 TRIM44Q96DX7 344 aaPredicted RBP23.91■■□□□ 1.42
TRAK1-209ENST00000487159 CDK11BP21127 795 aaKnown RBP23.9■■□□□ 1.42
TRAK1-209ENST00000487159 ERICH6BQ5W0A0 696 aa23.87■■□□□ 1.41
TRAK1-209ENST00000487159 CCDC136Q96JN2 1154 aa23.82■■□□□ 1.4
TRAK1-209ENST00000487159 ZNF326Q5BKZ1 582 aaKnown RBP23.82■■□□□ 1.4
TRAK1-209ENST00000487159 RTN4Q9NQC3 1192 aaKnown RBP23.81■■□□□ 1.4
TRAK1-209ENST00000487159 NAP1L5Q96NT1 182 aaPredicted RBP23.79■■□□□ 1.4
TRAK1-209ENST00000487159 HNRNPUQ00839 825 aaKnown RBP eCLIP23.77■■□□□ 1.4
TRAK1-209ENST00000487159 NEFMP07197 916 aa23.76■■□□□ 1.39
TRAK1-209ENST00000487159 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
TRAK1-209ENST00000487159 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
TRAK1-209ENST00000487159 DDRGK1Q96HY6 314 aa23.65■■□□□ 1.38
TRAK1-209ENST00000487159 ABCC9O60706 1549 aa23.64■■□□□ 1.38
TRAK1-209ENST00000487159 DNTTIP2Q5QJE6 756 aaKnown RBP23.58■■□□□ 1.37
TRAK1-209ENST00000487159 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.58■■□□□ 1.36
TRAK1-209ENST00000487159 NCLP19338 710 aaKnown RBP23.56■■□□□ 1.36
TRAK1-209ENST00000487159 BECN1Q14457 450 aa23.55■■□□□ 1.36
TRAK1-209ENST00000487159 PPM1GO15355 546 aaPredicted RBP23.55■■□□□ 1.36
TRAK1-209ENST00000487159 FAM9BQ8IZU0 186 aa23.55■■□□□ 1.36
TRAK1-209ENST00000487159 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
TRAK1-209ENST00000487159 PTMAP06454 111 aaKnown RBP23.53■■□□□ 1.36
TRAK1-209ENST00000487159 FBLN2P98095 1184 aa23.5■■□□□ 1.35
TRAK1-209ENST00000487159 GOLGA6L22H0YM25 854 aa23.5■■□□□ 1.35
TRAK1-209ENST00000487159 IRX6P78412 446 aaPredicted RBP23.47■■□□□ 1.35
TRAK1-209ENST00000487159 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
TRAK1-209ENST00000487159 SALL2Q9Y467 1007 aaPredicted RBP23.39■■□□□ 1.33
TRAK1-209ENST00000487159 DEKP35659 375 aaKnown RBP23.38■■□□□ 1.33
TRAK1-209ENST00000487159 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
TRAK1-209ENST00000487159 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.33
TRAK1-209ENST00000487159 MIER1Q8N108 512 aa23.33■■□□□ 1.32
TRAK1-209ENST00000487159 TMC1Q8TDI8 760 aa23.26■■□□□ 1.31
TRAK1-209ENST00000487159 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
TRAK1-209ENST00000487159 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
TRAK1-209ENST00000487159 TONSLQ96HA7 1378 aa23.19■■□□□ 1.3
TRAK1-209ENST00000487159 ARID4BQ4LE39 1312 aaPredicted RBP23.18■■□□□ 1.3
TRAK1-209ENST00000487159 ZRSR1Q15695 479 aaKnown RBP23.16■■□□□ 1.3
TRAK1-209ENST00000487159 CHAF1AQ13111 956 aaPredicted RBP23.14■■□□□ 1.3
TRAK1-209ENST00000487159 L1TD1Q5T7N2 865 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms