RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
THSD1-202ENST00000349258 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
THSD1-202ENST00000349258 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
THSD1-202ENST00000349258 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
THSD1-202ENST00000349258 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
THSD1-202ENST00000349258 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
THSD1-202ENST00000349258 ABCC9O60706 1549 aa28.85■■■□□ 2.21
THSD1-202ENST00000349258 DCAF1Q9Y4B6 1507 aa28.73■■■□□ 2.19
THSD1-202ENST00000349258 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
THSD1-202ENST00000349258 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
THSD1-202ENST00000349258 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
THSD1-202ENST00000349258 NACADO15069 1562 aa28.02■■■□□ 2.08
THSD1-202ENST00000349258 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
THSD1-202ENST00000349258 CECR2Q9BXF3 1484 aa27.82■■■□□ 2.04
THSD1-202ENST00000349258 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
THSD1-202ENST00000349258 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
THSD1-202ENST00000349258 LOC105371045A0A1W2PR82 267 aa27.67■■■□□ 2.02
THSD1-202ENST00000349258 MROH2BQ7Z745 1585 aa27.58■■■□□ 2.01
THSD1-202ENST00000349258 EHMT2Q96KQ7 1210 aa27.55■■■□□ 2
THSD1-202ENST00000349258 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
THSD1-202ENST00000349258 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
THSD1-202ENST00000349258 WIZO95785 1651 aa27.39■■□□□ 1.98
THSD1-202ENST00000349258 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
THSD1-202ENST00000349258 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
THSD1-202ENST00000349258 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
THSD1-202ENST00000349258 SMARCA4P51532 1647 aa27■■□□□ 1.91
THSD1-202ENST00000349258 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
THSD1-202ENST00000349258 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
THSD1-202ENST00000349258 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
THSD1-202ENST00000349258 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
THSD1-202ENST00000349258 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
THSD1-202ENST00000349258 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
THSD1-202ENST00000349258 HRCP23327 699 aa26.54■■□□□ 1.84
THSD1-202ENST00000349258 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
THSD1-202ENST00000349258 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
THSD1-202ENST00000349258 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
THSD1-202ENST00000349258 EIF4G1Q04637 1599 aaKnown RBP26.48■■□□□ 1.83
THSD1-202ENST00000349258 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
THSD1-202ENST00000349258 SOGA1O94964 1423 aa26.43■■□□□ 1.82
THSD1-202ENST00000349258 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.81
THSD1-202ENST00000349258 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
THSD1-202ENST00000349258 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
THSD1-202ENST00000349258 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
THSD1-202ENST00000349258 PEG3Q9GZU2 1588 aa26.3■■□□□ 1.8
THSD1-202ENST00000349258 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
THSD1-202ENST00000349258 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
THSD1-202ENST00000349258 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
THSD1-202ENST00000349258 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
THSD1-202ENST00000349258 EEA1Q15075 1411 aa25.92■■□□□ 1.74
THSD1-202ENST00000349258 TNIKQ9UKE5 1360 aa25.91■■□□□ 1.74
THSD1-202ENST00000349258 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
THSD1-202ENST00000349258 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
THSD1-202ENST00000349258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.82■■□□□ 1.72
THSD1-202ENST00000349258 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
THSD1-202ENST00000349258 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
THSD1-202ENST00000349258 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
THSD1-202ENST00000349258 CFTRP13569 1480 aa25.7■■□□□ 1.7
THSD1-202ENST00000349258 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
THSD1-202ENST00000349258 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
THSD1-202ENST00000349258 CLIP1P30622 1438 aa25.68■■□□□ 1.7
THSD1-202ENST00000349258 CUX1P39880 1505 aa25.67■■□□□ 1.7
THSD1-202ENST00000349258 APLP2Q06481 763 aa25.65■■□□□ 1.7
THSD1-202ENST00000349258 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.69
THSD1-202ENST00000349258 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
THSD1-202ENST00000349258 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
THSD1-202ENST00000349258 HNRNPUL2Q1KMD3 747 aaKnown RBP25.56■■□□□ 1.68
THSD1-202ENST00000349258 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
THSD1-202ENST00000349258 KIF21BO75037 1637 aa25.52■■□□□ 1.68
THSD1-202ENST00000349258 NESP48681 1621 aa25.5■■□□□ 1.67
THSD1-202ENST00000349258 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
THSD1-202ENST00000349258 CUX2O14529 1486 aa25.47■■□□□ 1.67
THSD1-202ENST00000349258 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
THSD1-202ENST00000349258 VPS8Q8N3P4 1428 aa25.38■■□□□ 1.65
THSD1-202ENST00000349258 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
THSD1-202ENST00000349258 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
THSD1-202ENST00000349258 P3H3Q8IVL6 736 aa25.36■■□□□ 1.65
THSD1-202ENST00000349258 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
THSD1-202ENST00000349258 IGF1RP08069 1367 aa25.31■■□□□ 1.64
THSD1-202ENST00000349258 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
THSD1-202ENST00000349258 KANK4Q5T7N3 995 aaPredicted RBP25.27■■□□□ 1.64
THSD1-202ENST00000349258 CARMIL1Q5VZK9 1371 aa25.25■■□□□ 1.63
THSD1-202ENST00000349258 ITGAEP38570 1179 aa25.21■■□□□ 1.63
THSD1-202ENST00000349258 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.63
THSD1-202ENST00000349258 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
THSD1-202ENST00000349258 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
THSD1-202ENST00000349258 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
THSD1-202ENST00000349258 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
THSD1-202ENST00000349258 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
THSD1-202ENST00000349258 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
THSD1-202ENST00000349258 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
THSD1-202ENST00000349258 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
THSD1-202ENST00000349258 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
THSD1-202ENST00000349258 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
THSD1-202ENST00000349258 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
THSD1-202ENST00000349258 FHOD3Q2V2M9 1422 aa24.9■■□□□ 1.58
THSD1-202ENST00000349258 FAM50AQ14320 339 aaKnown RBP24.87■■□□□ 1.57
THSD1-202ENST00000349258 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
THSD1-202ENST00000349258 GAPVD1Q14C86 1478 aa24.8■■□□□ 1.56
THSD1-202ENST00000349258 KIF21AQ7Z4S6 1674 aa24.79■■□□□ 1.56
THSD1-202ENST00000349258 DIEXFQ68CQ4 756 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms