RNA–Protein interactions for RNA: ENST00000519476.6

LETM2-205, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LETM2, Length 2,240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-205ENST00000519476 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
LETM2-205ENST00000519476 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
LETM2-205ENST00000519476 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
LETM2-205ENST00000519476 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
LETM2-205ENST00000519476 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
LETM2-205ENST00000519476 DCAF1Q9Y4B6 1507 aa27.98■■■□□ 2.07
LETM2-205ENST00000519476 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
LETM2-205ENST00000519476 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
LETM2-205ENST00000519476 MYO15BQ96JP2 1530 aa27.74■■■□□ 2.03
LETM2-205ENST00000519476 HRCP23327 699 aa27.37■■□□□ 1.97
LETM2-205ENST00000519476 ABCC9O60706 1549 aa27.18■■□□□ 1.94
LETM2-205ENST00000519476 PCGF6Q9BYE7 350 aa27.14■■□□□ 1.94
LETM2-205ENST00000519476 LOC105371045A0A1W2PR82 267 aa26.96■■□□□ 1.91
LETM2-205ENST00000519476 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
LETM2-205ENST00000519476 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
LETM2-205ENST00000519476 TRIM26Q12899 539 aaPredicted RBP26.71■■□□□ 1.87
LETM2-205ENST00000519476 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
LETM2-205ENST00000519476 NACADO15069 1562 aa26.62■■□□□ 1.85
LETM2-205ENST00000519476 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
LETM2-205ENST00000519476 PPARGC1BQ86YN6 1023 aaKnown RBP26.6■■□□□ 1.85
LETM2-205ENST00000519476 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
LETM2-205ENST00000519476 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
LETM2-205ENST00000519476 ZEB1P37275 1124 aaPredicted RBP26.3■■□□□ 1.8
LETM2-205ENST00000519476 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
LETM2-205ENST00000519476 WIZO95785 1651 aa26.19■■□□□ 1.78
LETM2-205ENST00000519476 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
LETM2-205ENST00000519476 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
LETM2-205ENST00000519476 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
LETM2-205ENST00000519476 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
LETM2-205ENST00000519476 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.73
LETM2-205ENST00000519476 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
LETM2-205ENST00000519476 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
LETM2-205ENST00000519476 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
LETM2-205ENST00000519476 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
LETM2-205ENST00000519476 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
LETM2-205ENST00000519476 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
LETM2-205ENST00000519476 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
LETM2-205ENST00000519476 EEA1Q15075 1411 aa25.57■■□□□ 1.68
LETM2-205ENST00000519476 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
LETM2-205ENST00000519476 CEP162Q5TB80 1403 aa25.52■■□□□ 1.68
LETM2-205ENST00000519476 SOGA1O94964 1423 aa25.49■■□□□ 1.67
LETM2-205ENST00000519476 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
LETM2-205ENST00000519476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
LETM2-205ENST00000519476 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
LETM2-205ENST00000519476 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
LETM2-205ENST00000519476 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
LETM2-205ENST00000519476 GOLGA3Q08378 1498 aa25.33■■□□□ 1.64
LETM2-205ENST00000519476 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
LETM2-205ENST00000519476 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
LETM2-205ENST00000519476 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
LETM2-205ENST00000519476 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
LETM2-205ENST00000519476 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
LETM2-205ENST00000519476 ACIN1Q9UKV3 1341 aaKnown RBP25.17■■□□□ 1.62
LETM2-205ENST00000519476 KIF21BO75037 1637 aa25.14■■□□□ 1.62
LETM2-205ENST00000519476 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
LETM2-205ENST00000519476 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
LETM2-205ENST00000519476 DIEXFQ68CQ4 756 aaKnown RBP25.11■■□□□ 1.61
LETM2-205ENST00000519476 MYT1Q01538 1121 aa25.07■■□□□ 1.6
LETM2-205ENST00000519476 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
LETM2-205ENST00000519476 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
LETM2-205ENST00000519476 CLIP1P30622 1438 aa25.02■■□□□ 1.6
LETM2-205ENST00000519476 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
LETM2-205ENST00000519476 CENPBP07199 599 aaPredicted RBP24.94■■□□□ 1.58
LETM2-205ENST00000519476 ZNF316A6NFI3 1004 aaPredicted RBP24.91■■□□□ 1.58
LETM2-205ENST00000519476 RAPGEF2Q9Y4G8 1499 aa24.88■■□□□ 1.57
LETM2-205ENST00000519476 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
LETM2-205ENST00000519476 GTF3C3Q9Y5Q9 886 aa24.85■■□□□ 1.57
LETM2-205ENST00000519476 APLP2Q06481 763 aa24.84■■□□□ 1.57
LETM2-205ENST00000519476 HNRNPUL2Q1KMD3 747 aaKnown RBP24.8■■□□□ 1.56
LETM2-205ENST00000519476 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
LETM2-205ENST00000519476 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
LETM2-205ENST00000519476 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
LETM2-205ENST00000519476 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
LETM2-205ENST00000519476 NCAPD3P42695 1498 aa24.63■■□□□ 1.53
LETM2-205ENST00000519476 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
LETM2-205ENST00000519476 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
LETM2-205ENST00000519476 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
LETM2-205ENST00000519476 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
LETM2-205ENST00000519476 CUX1P39880 1505 aa24.53■■□□□ 1.52
LETM2-205ENST00000519476 MIER1Q8N108 512 aa24.5■■□□□ 1.51
LETM2-205ENST00000519476 CFTRP13569 1480 aa24.47■■□□□ 1.51
LETM2-205ENST00000519476 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
LETM2-205ENST00000519476 RRBP1Q9P2E9 1410 aaKnown RBP24.43■■□□□ 1.5
LETM2-205ENST00000519476 KANK4Q5T7N3 995 aaPredicted RBP24.41■■□□□ 1.5
LETM2-205ENST00000519476 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
LETM2-205ENST00000519476 CUX2O14529 1486 aa24.34■■□□□ 1.49
LETM2-205ENST00000519476 ARHGAP35Q9NRY4 1499 aa24.34■■□□□ 1.49
LETM2-205ENST00000519476 CCNB3Q8WWL7 1395 aa24.28■■□□□ 1.48
LETM2-205ENST00000519476 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
LETM2-205ENST00000519476 IGF1RP08069 1367 aa24.22■■□□□ 1.47
LETM2-205ENST00000519476 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
LETM2-205ENST00000519476 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
LETM2-205ENST00000519476 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
LETM2-205ENST00000519476 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
LETM2-205ENST00000519476 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
LETM2-205ENST00000519476 RAB3GAP2Q9H2M9 1393 aa24.05■■□□□ 1.44
LETM2-205ENST00000519476 LRRC9Q6ZRR7 1453 aa24.04■■□□□ 1.44
LETM2-205ENST00000519476 FHAD1B1AJZ9 1412 aa24.04■■□□□ 1.44
LETM2-205ENST00000519476 ITGAEP38570 1179 aa24.03■■□□□ 1.44
LETM2-205ENST00000519476 SETD5Q9C0A6 1442 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms