Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.45□□□□□ -0.58
SND1-IT1Q9HBX3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 KRT89P-201ENST00000620027 1478 ntBASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 GCSHP5-201ENST00000443090 522 ntBASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY20P-201ENST00000450910 630 ntBASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC098590.1-201ENST00000468126 897 ntBASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC009154.2-201ENST00000621177 724 ntBASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 PCDHA3-202ENST00000532566 4594 ntBASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
SND1-IT1Q9HBX3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 KRT8P9-201ENST00000558927 1449 ntBASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 INGX-201ENST00000359239 846 ntBASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 AC112698.1-201ENST00000510299 916 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms