RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
PBX3-204ENST00000373489 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
PBX3-204ENST00000373489 HRCP23327 699 aa27.11■■□□□ 1.93
PBX3-204ENST00000373489 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
PBX3-204ENST00000373489 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
PBX3-204ENST00000373489 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.9
PBX3-204ENST00000373489 PPARGC1BQ86YN6 1023 aaKnown RBP26.75■■□□□ 1.87
PBX3-204ENST00000373489 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
PBX3-204ENST00000373489 PCGF6Q9BYE7 350 aa26.71■■□□□ 1.87
PBX3-204ENST00000373489 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
PBX3-204ENST00000373489 ABCC9O60706 1549 aa26.44■■□□□ 1.82
PBX3-204ENST00000373489 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
PBX3-204ENST00000373489 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
PBX3-204ENST00000373489 PELP1Q8IZL8 1130 aaKnown RBP26.02■■□□□ 1.76
PBX3-204ENST00000373489 NACADO15069 1562 aa25.91■■□□□ 1.74
PBX3-204ENST00000373489 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
PBX3-204ENST00000373489 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
PBX3-204ENST00000373489 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
PBX3-204ENST00000373489 RB1CC1Q8TDY2 1594 aa25.71■■□□□ 1.71
PBX3-204ENST00000373489 TRIM26Q12899 539 aaPredicted RBP25.69■■□□□ 1.7
PBX3-204ENST00000373489 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
PBX3-204ENST00000373489 UNC13AQ9UPW8 1703 aa25.16■■□□□ 1.62
PBX3-204ENST00000373489 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
PBX3-204ENST00000373489 NEUROD1Q13562 356 aa25.05■■□□□ 1.6
PBX3-204ENST00000373489 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
PBX3-204ENST00000373489 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
PBX3-204ENST00000373489 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
PBX3-204ENST00000373489 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
PBX3-204ENST00000373489 MYT1Q01538 1121 aa24.94■■□□□ 1.58
PBX3-204ENST00000373489 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
PBX3-204ENST00000373489 GTF3C3Q9Y5Q9 886 aa24.93■■□□□ 1.58
PBX3-204ENST00000373489 BICRAQ9NZM4 1560 aa24.92■■□□□ 1.58
PBX3-204ENST00000373489 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
PBX3-204ENST00000373489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
PBX3-204ENST00000373489 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
PBX3-204ENST00000373489 BAZ1AQ9NRL2 1556 aaPredicted RBP24.72■■□□□ 1.55
PBX3-204ENST00000373489 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.54
PBX3-204ENST00000373489 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
PBX3-204ENST00000373489 DIEXFQ68CQ4 756 aaKnown RBP24.66■■□□□ 1.54
PBX3-204ENST00000373489 WIZO95785 1651 aa24.6■■□□□ 1.53
PBX3-204ENST00000373489 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
PBX3-204ENST00000373489 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
PBX3-204ENST00000373489 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
PBX3-204ENST00000373489 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
PBX3-204ENST00000373489 PEG3Q9GZU2 1588 aa24.22■■□□□ 1.47
PBX3-204ENST00000373489 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.47
PBX3-204ENST00000373489 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
PBX3-204ENST00000373489 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
PBX3-204ENST00000373489 ZNF316A6NFI3 1004 aaPredicted RBP24.13■■□□□ 1.45
PBX3-204ENST00000373489 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
PBX3-204ENST00000373489 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
PBX3-204ENST00000373489 MIER1Q8N108 512 aa24.06■■□□□ 1.44
PBX3-204ENST00000373489 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
PBX3-204ENST00000373489 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
PBX3-204ENST00000373489 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
PBX3-204ENST00000373489 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
PBX3-204ENST00000373489 SOGA1O94964 1423 aa23.74■■□□□ 1.39
PBX3-204ENST00000373489 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
PBX3-204ENST00000373489 SUPT16HQ9Y5B9 1047 aaKnown RBP23.66■■□□□ 1.38
PBX3-204ENST00000373489 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
PBX3-204ENST00000373489 WRNQ14191 1432 aaPredicted RBP eCLIP23.63■■□□□ 1.37
PBX3-204ENST00000373489 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
PBX3-204ENST00000373489 EEA1Q15075 1411 aa23.6■■□□□ 1.37
PBX3-204ENST00000373489 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
PBX3-204ENST00000373489 ANP32EQ9BTT0 268 aa23.59■■□□□ 1.37
PBX3-204ENST00000373489 BCL11AQ9H165 835 aa23.59■■□□□ 1.37
PBX3-204ENST00000373489 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
PBX3-204ENST00000373489 TSHZ2Q9NRE2 1034 aa23.57■■□□□ 1.36
PBX3-204ENST00000373489 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
PBX3-204ENST00000373489 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
PBX3-204ENST00000373489 CFTRP13569 1480 aa23.46■■□□□ 1.35
PBX3-204ENST00000373489 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
PBX3-204ENST00000373489 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
PBX3-204ENST00000373489 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
PBX3-204ENST00000373489 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
PBX3-204ENST00000373489 BCANQ96GW7 911 aa23.34■■□□□ 1.33
PBX3-204ENST00000373489 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
PBX3-204ENST00000373489 KIF21BO75037 1637 aa23.29■■□□□ 1.32
PBX3-204ENST00000373489 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
PBX3-204ENST00000373489 NESP48681 1621 aa23.22■■□□□ 1.31
PBX3-204ENST00000373489 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
PBX3-204ENST00000373489 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
PBX3-204ENST00000373489 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
PBX3-204ENST00000373489 CUX1P39880 1505 aa23.17■■□□□ 1.3
PBX3-204ENST00000373489 CLIP1P30622 1438 aa23.17■■□□□ 1.3
PBX3-204ENST00000373489 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
PBX3-204ENST00000373489 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
PBX3-204ENST00000373489 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.3
PBX3-204ENST00000373489 APLP2Q06481 763 aa23.14■■□□□ 1.29
PBX3-204ENST00000373489 FKBP8Q14318 412 aa23.11■■□□□ 1.29
PBX3-204ENST00000373489 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
PBX3-204ENST00000373489 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
PBX3-204ENST00000373489 RBM19Q9Y4C8 960 aaKnown RBP23.03■■□□□ 1.28
PBX3-204ENST00000373489 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
PBX3-204ENST00000373489 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
PBX3-204ENST00000373489 ITGAEP38570 1179 aa22.97■■□□□ 1.27
PBX3-204ENST00000373489 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
PBX3-204ENST00000373489 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
PBX3-204ENST00000373489 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
PBX3-204ENST00000373489 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms