Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA1P02708 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA1P02708 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNA1P02708 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA1P02708 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA1P02708 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNA1P02708 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA1P02708 MIR4453-201ENST00000584019 89 ntBASIC18.36■□□□□ 0.53
CHRNA1P02708 AL158211.3-201ENST00000607385 239 ntBASIC18.36■□□□□ 0.53
CHRNA1P02708 LINC00895-201ENST00000629028 1637 ntBASIC18.36■□□□□ 0.53
CHRNA1P02708 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA1P02708 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA1P02708 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA1P02708 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA1P02708 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA1P02708 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.35■□□□□ 0.53
CHRNA1P02708 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.35■□□□□ 0.53
CHRNA1P02708 AC092580.3-201ENST00000430932 139 ntBASIC18.35■□□□□ 0.53
CHRNA1P02708 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRNA1P02708 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.35■□□□□ 0.53
CHRNA1P02708 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 AC069120.2-201ENST00000524091 540 ntBASIC18.35■□□□□ 0.53
CHRNA1P02708 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA1P02708 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA1P02708 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA1P02708 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA1P02708 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA1P02708 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.34■□□□□ 0.53
CHRNA1P02708 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA1P02708 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.34■□□□□ 0.53
CHRNA1P02708 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA1P02708 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 IGHV3-42-201ENST00000520410 361 ntBASIC18.34■□□□□ 0.53
CHRNA1P02708 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA1P02708 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
CHRNA1P02708 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRNA1P02708 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 AC239800.4-201ENST00000603712 296 ntBASIC18.34■□□□□ 0.53
CHRNA1P02708 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA1P02708 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA1P02708 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA1P02708 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
CHRNA1P02708 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA1P02708 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms