RNA–Protein interactions for RNA: ENST00000428695.5

SATB2-203, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene SATB2, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-203ENST00000428695 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
SATB2-203ENST00000428695 CCDC180Q9P1Z9 1646 aa33.01■■■□□ 2.87
SATB2-203ENST00000428695 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
SATB2-203ENST00000428695 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
SATB2-203ENST00000428695 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
SATB2-203ENST00000428695 DCAF8L2P0C7V8 631 aa31.48■■■□□ 2.63
SATB2-203ENST00000428695 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
SATB2-203ENST00000428695 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.53
SATB2-203ENST00000428695 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
SATB2-203ENST00000428695 ABCC9O60706 1549 aa30.53■■■□□ 2.48
SATB2-203ENST00000428695 NACADO15069 1562 aa30.51■■■□□ 2.48
SATB2-203ENST00000428695 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
SATB2-203ENST00000428695 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
SATB2-203ENST00000428695 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
SATB2-203ENST00000428695 CECR2Q9BXF3 1484 aa29.77■■■□□ 2.36
SATB2-203ENST00000428695 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.34
SATB2-203ENST00000428695 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
SATB2-203ENST00000428695 WIZO95785 1651 aa29.55■■■□□ 2.32
SATB2-203ENST00000428695 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
SATB2-203ENST00000428695 SMARCA4P51532 1647 aa29.32■■■□□ 2.28
SATB2-203ENST00000428695 LOC105371045A0A1W2PR82 267 aa29.21■■■□□ 2.27
SATB2-203ENST00000428695 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
SATB2-203ENST00000428695 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
SATB2-203ENST00000428695 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
SATB2-203ENST00000428695 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
SATB2-203ENST00000428695 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
SATB2-203ENST00000428695 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
SATB2-203ENST00000428695 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
SATB2-203ENST00000428695 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
SATB2-203ENST00000428695 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
SATB2-203ENST00000428695 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
SATB2-203ENST00000428695 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
SATB2-203ENST00000428695 HRCP23327 699 aa28.64■■■□□ 2.18
SATB2-203ENST00000428695 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
SATB2-203ENST00000428695 TRIM26Q12899 539 aaPredicted RBP28.51■■■□□ 2.15
SATB2-203ENST00000428695 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
SATB2-203ENST00000428695 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
SATB2-203ENST00000428695 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
SATB2-203ENST00000428695 EEA1Q15075 1411 aa28.28■■■□□ 2.12
SATB2-203ENST00000428695 SOGA1O94964 1423 aa28.26■■■□□ 2.12
SATB2-203ENST00000428695 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
SATB2-203ENST00000428695 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
SATB2-203ENST00000428695 NCAPD3P42695 1498 aa28.14■■■□□ 2.1
SATB2-203ENST00000428695 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
SATB2-203ENST00000428695 CSRNP3Q8WYN3 585 aa28.09■■■□□ 2.09
SATB2-203ENST00000428695 TNIKQ9UKE5 1360 aa28.05■■■□□ 2.08
SATB2-203ENST00000428695 CEP162Q5TB80 1403 aa28.02■■■□□ 2.08
SATB2-203ENST00000428695 GOLGA3Q08378 1498 aa28■■■□□ 2.07
SATB2-203ENST00000428695 TOP2BQ02880 1626 aa27.97■■■□□ 2.07
SATB2-203ENST00000428695 KIF21BO75037 1637 aa27.94■■■□□ 2.06
SATB2-203ENST00000428695 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
SATB2-203ENST00000428695 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
SATB2-203ENST00000428695 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
SATB2-203ENST00000428695 UBTFP17480 764 aaKnown RBP27.86■■■□□ 2.05
SATB2-203ENST00000428695 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
SATB2-203ENST00000428695 CFTRP13569 1480 aa27.79■■■□□ 2.04
SATB2-203ENST00000428695 ZEB1P37275 1124 aaPredicted RBP27.77■■■□□ 2.04
SATB2-203ENST00000428695 CUX1P39880 1505 aa27.71■■■□□ 2.03
SATB2-203ENST00000428695 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
SATB2-203ENST00000428695 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
SATB2-203ENST00000428695 CLIP1P30622 1438 aa27.58■■■□□ 2.01
SATB2-203ENST00000428695 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
SATB2-203ENST00000428695 PRXQ9BXM0 1461 aa27.51■■■□□ 2
SATB2-203ENST00000428695 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
SATB2-203ENST00000428695 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
SATB2-203ENST00000428695 VPS8Q8N3P4 1428 aa27.46■■□□□ 1.99
SATB2-203ENST00000428695 TTBK1Q5TCY1 1321 aaPredicted RBP27.45■■□□□ 1.98
SATB2-203ENST00000428695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
SATB2-203ENST00000428695 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
SATB2-203ENST00000428695 FGD5Q6ZNL6 1462 aa27.26■■□□□ 1.95
SATB2-203ENST00000428695 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
SATB2-203ENST00000428695 CUX2O14529 1486 aa27.25■■□□□ 1.95
SATB2-203ENST00000428695 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
SATB2-203ENST00000428695 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
SATB2-203ENST00000428695 APLP2Q06481 763 aa27.2■■□□□ 1.95
SATB2-203ENST00000428695 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
SATB2-203ENST00000428695 IGF1RP08069 1367 aa27.15■■□□□ 1.94
SATB2-203ENST00000428695 NESP48681 1621 aa27.09■■□□□ 1.93
SATB2-203ENST00000428695 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
SATB2-203ENST00000428695 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
SATB2-203ENST00000428695 ARHGAP35Q9NRY4 1499 aa27.05■■□□□ 1.92
SATB2-203ENST00000428695 CARMIL1Q5VZK9 1371 aa27.03■■□□□ 1.92
SATB2-203ENST00000428695 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
SATB2-203ENST00000428695 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
SATB2-203ENST00000428695 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.9
SATB2-203ENST00000428695 HNRNPUL2Q1KMD3 747 aaKnown RBP26.93■■□□□ 1.9
SATB2-203ENST00000428695 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
SATB2-203ENST00000428695 CUL7Q14999 1698 aa26.9■■□□□ 1.9
SATB2-203ENST00000428695 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
SATB2-203ENST00000428695 KANK4Q5T7N3 995 aaPredicted RBP26.85■■□□□ 1.89
SATB2-203ENST00000428695 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
SATB2-203ENST00000428695 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
SATB2-203ENST00000428695 CTTNBP2Q8WZ74 1663 aa26.79■■□□□ 1.88
SATB2-203ENST00000428695 MAP3K1Q13233 1512 aa26.78■■□□□ 1.88
SATB2-203ENST00000428695 RRBP1Q9P2E9 1410 aaKnown RBP26.77■■□□□ 1.88
SATB2-203ENST00000428695 TIAM1Q13009 1591 aa26.76■■□□□ 1.87
SATB2-203ENST00000428695 ABCA5Q8WWZ7 1642 aa26.75■■□□□ 1.87
SATB2-203ENST00000428695 DNAJC5BQ9UF47 199 aa26.71■■□□□ 1.87
SATB2-203ENST00000428695 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
SATB2-203ENST00000428695 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms