RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 NISCHQ9Y2I1 1504 aa34.59■■■■□ 3.13
LRCH1-201ENST00000311191 DCAF8L2P0C7V8 631 aa33.22■■■□□ 2.91
LRCH1-201ENST00000311191 ABCC9O60706 1549 aa30.34■■■□□ 2.45
LRCH1-201ENST00000311191 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
LRCH1-201ENST00000311191 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
LRCH1-201ENST00000311191 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
LRCH1-201ENST00000311191 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
LRCH1-201ENST00000311191 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
LRCH1-201ENST00000311191 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
LRCH1-201ENST00000311191 NACADO15069 1562 aa28.74■■■□□ 2.19
LRCH1-201ENST00000311191 APLP2Q06481 763 aa28.6■■■□□ 2.17
LRCH1-201ENST00000311191 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
LRCH1-201ENST00000311191 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
LRCH1-201ENST00000311191 TRIM41Q8WV44 630 aa28.42■■■□□ 2.14
LRCH1-201ENST00000311191 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
LRCH1-201ENST00000311191 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
LRCH1-201ENST00000311191 UBTFP17480 764 aaKnown RBP27.96■■■□□ 2.07
LRCH1-201ENST00000311191 ATP1B4Q9UN42 357 aaPredicted RBP27.91■■■□□ 2.06
LRCH1-201ENST00000311191 MYO15BQ96JP2 1530 aa27.84■■■□□ 2.05
LRCH1-201ENST00000311191 RANGAP1P46060 587 aaPredicted RBP27.79■■■□□ 2.04
LRCH1-201ENST00000311191 FBLN2P98095 1184 aa27.62■■■□□ 2.01
LRCH1-201ENST00000311191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.62■■■□□ 2.01
LRCH1-201ENST00000311191 HNRNPUL2Q1KMD3 747 aaKnown RBP27.62■■■□□ 2.01
LRCH1-201ENST00000311191 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
LRCH1-201ENST00000311191 TTBK1Q5TCY1 1321 aaPredicted RBP27.48■■□□□ 1.99
LRCH1-201ENST00000311191 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
LRCH1-201ENST00000311191 MYT1LQ9UL68 1186 aa27.43■■□□□ 1.98
LRCH1-201ENST00000311191 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
LRCH1-201ENST00000311191 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
LRCH1-201ENST00000311191 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
LRCH1-201ENST00000311191 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
LRCH1-201ENST00000311191 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
LRCH1-201ENST00000311191 CHMP7Q8WUX9 453 aaPredicted RBP27.04■■□□□ 1.92
LRCH1-201ENST00000311191 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
LRCH1-201ENST00000311191 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
LRCH1-201ENST00000311191 CDK11AQ9UQ88 783 aaPredicted RBP26.87■■□□□ 1.89
LRCH1-201ENST00000311191 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
LRCH1-201ENST00000311191 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
LRCH1-201ENST00000311191 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
LRCH1-201ENST00000311191 ESF1Q9H501 851 aaKnown RBP26.53■■□□□ 1.84
LRCH1-201ENST00000311191 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
LRCH1-201ENST00000311191 EIF4G1Q04637 1599 aaKnown RBP26.48■■□□□ 1.83
LRCH1-201ENST00000311191 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.83
LRCH1-201ENST00000311191 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
LRCH1-201ENST00000311191 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
LRCH1-201ENST00000311191 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
LRCH1-201ENST00000311191 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
LRCH1-201ENST00000311191 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
LRCH1-201ENST00000311191 EEA1Q15075 1411 aa26.38■■□□□ 1.81
LRCH1-201ENST00000311191 P3H3Q8IVL6 736 aa26.38■■□□□ 1.81
LRCH1-201ENST00000311191 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
LRCH1-201ENST00000311191 ITGAEP38570 1179 aa26.32■■□□□ 1.8
LRCH1-201ENST00000311191 FAM50AQ14320 339 aaKnown RBP26.25■■□□□ 1.79
LRCH1-201ENST00000311191 CCDC88BA6NC98 1476 aa26.2■■□□□ 1.79
LRCH1-201ENST00000311191 ARID3CA6NKF2 412 aa26.19■■□□□ 1.78
LRCH1-201ENST00000311191 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
LRCH1-201ENST00000311191 SOGA1O94964 1423 aa26.19■■□□□ 1.78
LRCH1-201ENST00000311191 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
LRCH1-201ENST00000311191 TRHP20396 242 aaPredicted RBP26.17■■□□□ 1.78
LRCH1-201ENST00000311191 CCER1Q8TC90 406 aaPredicted RBP26.16■■□□□ 1.78
LRCH1-201ENST00000311191 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
LRCH1-201ENST00000311191 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.77
LRCH1-201ENST00000311191 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
LRCH1-201ENST00000311191 ZNF777Q9ULD5 760 aaPredicted RBP26.11■■□□□ 1.77
LRCH1-201ENST00000311191 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
LRCH1-201ENST00000311191 CUX2O14529 1486 aa26.08■■□□□ 1.77
LRCH1-201ENST00000311191 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
LRCH1-201ENST00000311191 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
LRCH1-201ENST00000311191 TRIM52Q96A61 297 aa26.03■■□□□ 1.76
LRCH1-201ENST00000311191 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
LRCH1-201ENST00000311191 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
LRCH1-201ENST00000311191 WIZO95785 1651 aa25.98■■□□□ 1.75
LRCH1-201ENST00000311191 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.74
LRCH1-201ENST00000311191 TSPY4P0CV99 314 aa25.92■■□□□ 1.74
LRCH1-201ENST00000311191 TSPY10P0CW01 314 aa25.92■■□□□ 1.74
LRCH1-201ENST00000311191 BCANQ96GW7 911 aa25.92■■□□□ 1.74
LRCH1-201ENST00000311191 KCNH8Q96L42 1107 aa25.91■■□□□ 1.74
LRCH1-201ENST00000311191 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
LRCH1-201ENST00000311191 MTUS2Q5JR59 1369 aa25.88■■□□□ 1.73
LRCH1-201ENST00000311191 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
LRCH1-201ENST00000311191 TRIM26Q12899 539 aaPredicted RBP25.87■■□□□ 1.73
LRCH1-201ENST00000311191 STAG3Q9UJ98 1225 aa25.86■■□□□ 1.73
LRCH1-201ENST00000311191 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
LRCH1-201ENST00000311191 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.72
LRCH1-201ENST00000311191 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
LRCH1-201ENST00000311191 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
LRCH1-201ENST00000311191 ACIN1Q9UKV3 1341 aaKnown RBP25.74■■□□□ 1.71
LRCH1-201ENST00000311191 CLIP1P30622 1438 aa25.72■■□□□ 1.71
LRCH1-201ENST00000311191 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
LRCH1-201ENST00000311191 LAMC3Q9Y6N6 1575 aa25.64■■□□□ 1.69
LRCH1-201ENST00000311191 CFTRP13569 1480 aa25.63■■□□□ 1.69
LRCH1-201ENST00000311191 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
LRCH1-201ENST00000311191 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
LRCH1-201ENST00000311191 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
LRCH1-201ENST00000311191 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
LRCH1-201ENST00000311191 SLC4A1APQ9BWU0 796 aaKnown RBP25.56■■□□□ 1.68
LRCH1-201ENST00000311191 CYB5RLQ6IPT4 315 aa25.55■■□□□ 1.68
LRCH1-201ENST00000311191 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
LRCH1-201ENST00000311191 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
LRCH1-201ENST00000311191 CHGAP10645 457 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms