RNA–Protein interactions for RNA: ENST00000436005.2

PNKD-204, Transcript of PNKD, MBL domain containing, humanhuman

TSL 5 BASIC

Gene PNKD, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-204ENST00000436005 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
PNKD-204ENST00000436005 ABCC9O60706 1549 aa37.41■■■■□ 3.58
PNKD-204ENST00000436005 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
PNKD-204ENST00000436005 DNAJC5BQ9UF47 199 aa35.83■■■■□ 3.33
PNKD-204ENST00000436005 RB1CC1Q8TDY2 1594 aa35.17■■■■□ 3.22
PNKD-204ENST00000436005 PABPN1Q86U42 306 aaKnown RBP eCLIP34.78■■■■□ 3.16
PNKD-204ENST00000436005 NACADO15069 1562 aa34.77■■■■□ 3.16
PNKD-204ENST00000436005 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
PNKD-204ENST00000436005 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
PNKD-204ENST00000436005 BICRAQ9NZM4 1560 aa34.27■■■■□ 3.08
PNKD-204ENST00000436005 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
PNKD-204ENST00000436005 CECR2Q9BXF3 1484 aa33.74■■■□□ 2.99
PNKD-204ENST00000436005 CC2D2AQ9P2K1 1620 aa33.7■■■□□ 2.99
PNKD-204ENST00000436005 SHROOM4Q9ULL8 1493 aa33.6■■■□□ 2.97
PNKD-204ENST00000436005 EIF4G1Q04637 1599 aaKnown RBP33.46■■■□□ 2.95
PNKD-204ENST00000436005 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
PNKD-204ENST00000436005 SCRIBQ14160 1630 aa33.38■■■□□ 2.93
PNKD-204ENST00000436005 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
PNKD-204ENST00000436005 DNAJC5Q9H3Z4 198 aa33.32■■■□□ 2.92
PNKD-204ENST00000436005 CUX2O14529 1486 aa32.42■■■□□ 2.78
PNKD-204ENST00000436005 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
PNKD-204ENST00000436005 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
PNKD-204ENST00000436005 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
PNKD-204ENST00000436005 NESP48681 1621 aa31.96■■■□□ 2.71
PNKD-204ENST00000436005 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
PNKD-204ENST00000436005 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
PNKD-204ENST00000436005 SMARCA4P51532 1647 aa31.73■■■□□ 2.67
PNKD-204ENST00000436005 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
PNKD-204ENST00000436005 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
PNKD-204ENST00000436005 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
PNKD-204ENST00000436005 LAMC3Q9Y6N6 1575 aa31.49■■■□□ 2.63
PNKD-204ENST00000436005 BAZ1AQ9NRL2 1556 aaPredicted RBP31.45■■■□□ 2.63
PNKD-204ENST00000436005 KIF21AQ7Z4S6 1674 aa31.42■■■□□ 2.62
PNKD-204ENST00000436005 PEG3Q9GZU2 1588 aa31.41■■■□□ 2.62
PNKD-204ENST00000436005 PDS5BQ9NTI5 1447 aa31.37■■■□□ 2.61
PNKD-204ENST00000436005 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
PNKD-204ENST00000436005 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
PNKD-204ENST00000436005 MRC2Q9UBG0 1479 aa31.15■■■□□ 2.58
PNKD-204ENST00000436005 WDR62O43379 1518 aa31.09■■■□□ 2.57
PNKD-204ENST00000436005 OSCARQ8IYS5 282 aa30.9■■■□□ 2.54
PNKD-204ENST00000436005 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
PNKD-204ENST00000436005 WIZO95785 1651 aa30.82■■■□□ 2.52
PNKD-204ENST00000436005 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
PNKD-204ENST00000436005 CFTRP13569 1480 aa30.66■■■□□ 2.5
PNKD-204ENST00000436005 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
PNKD-204ENST00000436005 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
PNKD-204ENST00000436005 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
PNKD-204ENST00000436005 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
PNKD-204ENST00000436005 ARHGEF11O15085 1522 aa30.4■■■□□ 2.46
PNKD-204ENST00000436005 ZNF608Q9ULD9 1512 aaPredicted RBP30.4■■■□□ 2.46
PNKD-204ENST00000436005 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
PNKD-204ENST00000436005 TOP2AP11388 1531 aaKnown RBP30.34■■■□□ 2.45
PNKD-204ENST00000436005 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
PNKD-204ENST00000436005 CYB5RLQ6IPT4 315 aa30.28■■■□□ 2.44
PNKD-204ENST00000436005 TOPBP1Q92547 1522 aa30.15■■■□□ 2.42
PNKD-204ENST00000436005 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
PNKD-204ENST00000436005 TRHP20396 242 aaPredicted RBP30.14■■■□□ 2.42
PNKD-204ENST00000436005 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
PNKD-204ENST00000436005 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
PNKD-204ENST00000436005 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
PNKD-204ENST00000436005 AQRO60306 1485 aaKnown RBP eCLIP30.03■■■□□ 2.41e-6■■■■■ 34.9
PNKD-204ENST00000436005 CHD1O14646 1710 aa29.99■■■□□ 2.39
PNKD-204ENST00000436005 FBLN2P98095 1184 aa29.97■■■□□ 2.39
PNKD-204ENST00000436005 ABCC8Q09428 1581 aa29.95■■■□□ 2.39
PNKD-204ENST00000436005 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
PNKD-204ENST00000436005 TARBP1Q13395 1621 aaKnown RBP29.92■■■□□ 2.38
PNKD-204ENST00000436005 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
PNKD-204ENST00000436005 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
PNKD-204ENST00000436005 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
PNKD-204ENST00000436005 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
PNKD-204ENST00000436005 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
PNKD-204ENST00000436005 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
PNKD-204ENST00000436005 SOGA1O94964 1423 aa29.66■■■□□ 2.34
PNKD-204ENST00000436005 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
PNKD-204ENST00000436005 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
PNKD-204ENST00000436005 FGD5Q6ZNL6 1462 aa29.52■■■□□ 2.32
PNKD-204ENST00000436005 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
PNKD-204ENST00000436005 WDR97A6NE52 1622 aa29.45■■■□□ 2.31
PNKD-204ENST00000436005 GRIN2BQ13224 1484 aa29.45■■■□□ 2.31
PNKD-204ENST00000436005 SYNJ2O15056 1496 aa29.44■■■□□ 2.3
PNKD-204ENST00000436005 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
PNKD-204ENST00000436005 CUX1P39880 1505 aa29.4■■■□□ 2.3
PNKD-204ENST00000436005 ERCC6L2Q5T890 1561 aa29.24■■■□□ 2.27
PNKD-204ENST00000436005 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
PNKD-204ENST00000436005 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
PNKD-204ENST00000436005 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
PNKD-204ENST00000436005 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
PNKD-204ENST00000436005 CEP170Q5SW79 1584 aa29.06■■■□□ 2.24
PNKD-204ENST00000436005 NUP160Q12769 1436 aa29.02■■■□□ 2.24
PNKD-204ENST00000436005 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
PNKD-204ENST00000436005 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
PNKD-204ENST00000436005 KIF13AQ9H1H9 1805 aa28.93■■■□□ 2.22
PNKD-204ENST00000436005 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
PNKD-204ENST00000436005 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
PNKD-204ENST00000436005 PRG4Q92954 1404 aaPredicted RBP28.82■■■□□ 2.2
PNKD-204ENST00000436005 FAM69CQ0P6D2 419 aa28.78■■■□□ 2.2
PNKD-204ENST00000436005 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
PNKD-204ENST00000436005 ABCC10Q5T3U5 1492 aa28.74■■■□□ 2.19
PNKD-204ENST00000436005 KDM4FA0A1W2PPD8 638 aa28.71■■■□□ 2.19
PNKD-204ENST00000436005 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms