Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
APOA1P02647 AC104390.1-201ENST00000555663 520 ntBASIC15.27■□□□□ 0.04
APOA1P02647 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.27■□□□□ 0.04
APOA1P02647 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.27■□□□□ 0.04
APOA1P02647 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APOA1P02647 MIR4674-201ENST00000582457 87 ntBASIC15.27■□□□□ 0.04
APOA1P02647 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
APOA1P02647 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.27■□□□□ 0.04
APOA1P02647 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 FAM45BP-202ENST00000592932 1624 ntBASIC15.27■□□□□ 0.03
APOA1P02647 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.27■□□□□ 0.03
APOA1P02647 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
APOA1P02647 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
APOA1P02647 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.27■□□□□ 0.03
APOA1P02647 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
APOA1P02647 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.27■□□□□ 0.03
APOA1P02647 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.27■□□□□ 0.03
APOA1P02647 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
APOA1P02647 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
APOA1P02647 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
APOA1P02647 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 LINC00167-201ENST00000530583 1419 ntBASIC15.26■□□□□ 0.03
APOA1P02647 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
APOA1P02647 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
APOA1P02647 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.26■□□□□ 0.03
APOA1P02647 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.26■□□□□ 0.03
APOA1P02647 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
APOA1P02647 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 AL137784.2-201ENST00000607332 1000 ntBASIC15.26■□□□□ 0.03
APOA1P02647 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 AP002414.2-201ENST00000591780 3365 ntBASIC15.26■□□□□ 0.03
APOA1P02647 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.26■□□□□ 0.03
APOA1P02647 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOA1P02647 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.26■□□□□ 0.03
APOA1P02647 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.26■□□□□ 0.03
APOA1P02647 LINC02012-201ENST00000608206 1725 ntBASIC15.26■□□□□ 0.03
APOA1P02647 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
APOA1P02647 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.25■□□□□ 0.03
APOA1P02647 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.25■□□□□ 0.03
APOA1P02647 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOA1P02647 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.25■□□□□ 0.03
APOA1P02647 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms