RNA–Protein interactions for RNA: ENST00000246635.7

KRT13-201, Transcript of keratin 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KRT13, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13-201ENST00000246635 NISCHQ9Y2I1 1504 aa42.77■■■■■ 4.44
KRT13-201ENST00000246635 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
KRT13-201ENST00000246635 ABCC9O60706 1549 aa36.28■■■■□ 3.4
KRT13-201ENST00000246635 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
KRT13-201ENST00000246635 DCAF8L2P0C7V8 631 aa35.69■■■■□ 3.3
KRT13-201ENST00000246635 DCAF1Q9Y4B6 1507 aa35.33■■■■□ 3.25
KRT13-201ENST00000246635 NACADO15069 1562 aa35.22■■■■□ 3.23
KRT13-201ENST00000246635 MYO15BQ96JP2 1530 aa35.18■■■■□ 3.22
KRT13-201ENST00000246635 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
KRT13-201ENST00000246635 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
KRT13-201ENST00000246635 SHROOM4Q9ULL8 1493 aa34.44■■■■□ 3.1
KRT13-201ENST00000246635 UNC13AQ9UPW8 1703 aa34.35■■■■□ 3.09
KRT13-201ENST00000246635 PABPN1Q86U42 306 aaKnown RBP eCLIP34.11■■■■□ 3.05
KRT13-201ENST00000246635 BICRAQ9NZM4 1560 aa34.03■■■■□ 3.04
KRT13-201ENST00000246635 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
KRT13-201ENST00000246635 EIF4G1Q04637 1599 aaKnown RBP33.08■■■□□ 2.89
KRT13-201ENST00000246635 BAZ1AQ9NRL2 1556 aaPredicted RBP33.08■■■□□ 2.89
KRT13-201ENST00000246635 SMARCA4P51532 1647 aa33.02■■■□□ 2.88
KRT13-201ENST00000246635 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
KRT13-201ENST00000246635 RSF1Q96T23 1441 aaPredicted RBP32.9■■■□□ 2.86
KRT13-201ENST00000246635 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
KRT13-201ENST00000246635 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
KRT13-201ENST00000246635 WIZO95785 1651 aa32.72■■■□□ 2.83
KRT13-201ENST00000246635 DNAJC5BQ9UF47 199 aa32.69■■■□□ 2.82
KRT13-201ENST00000246635 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
KRT13-201ENST00000246635 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
KRT13-201ENST00000246635 PEG3Q9GZU2 1588 aa32.63■■■□□ 2.81
KRT13-201ENST00000246635 NCAPD3P42695 1498 aa32.52■■■□□ 2.8
KRT13-201ENST00000246635 BAZ1BQ9UIG0 1483 aaKnown RBP32.46■■■□□ 2.79
KRT13-201ENST00000246635 HMGXB3Q12766 1538 aa32.38■■■□□ 2.77
KRT13-201ENST00000246635 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
KRT13-201ENST00000246635 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
KRT13-201ENST00000246635 CADPSQ9ULU8 1353 aa31.66■■■□□ 2.66
KRT13-201ENST00000246635 NESP48681 1621 aa31.61■■■□□ 2.65
KRT13-201ENST00000246635 CFTRP13569 1480 aa31.59■■■□□ 2.65
KRT13-201ENST00000246635 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
KRT13-201ENST00000246635 PRDM2Q13029 1718 aa31.36■■■□□ 2.61
KRT13-201ENST00000246635 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
KRT13-201ENST00000246635 FANCD2Q9BXW9 1451 aa31.29■■■□□ 2.6
KRT13-201ENST00000246635 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
KRT13-201ENST00000246635 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
KRT13-201ENST00000246635 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
KRT13-201ENST00000246635 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
KRT13-201ENST00000246635 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
KRT13-201ENST00000246635 CHIC1Q5VXU3 224 aa30.97■■■□□ 2.55
KRT13-201ENST00000246635 MRC2Q9UBG0 1479 aa30.95■■■□□ 2.55
KRT13-201ENST00000246635 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
KRT13-201ENST00000246635 CUX1P39880 1505 aa30.91■■■□□ 2.54
KRT13-201ENST00000246635 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
KRT13-201ENST00000246635 SYNJ1O43426 1573 aa30.88■■■□□ 2.53
KRT13-201ENST00000246635 TOPBP1Q92547 1522 aa30.87■■■□□ 2.53
KRT13-201ENST00000246635 THOC2Q8NI27 1593 aaKnown RBP30.87■■■□□ 2.53
KRT13-201ENST00000246635 DNMBPQ6XZF7 1577 aa30.86■■■□□ 2.53
KRT13-201ENST00000246635 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
KRT13-201ENST00000246635 WDR62O43379 1518 aa30.8■■■□□ 2.52
KRT13-201ENST00000246635 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
KRT13-201ENST00000246635 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.51
KRT13-201ENST00000246635 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
KRT13-201ENST00000246635 SOGA1O94964 1423 aa30.59■■■□□ 2.49
KRT13-201ENST00000246635 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
KRT13-201ENST00000246635 CUX2O14529 1486 aa30.56■■■□□ 2.48
KRT13-201ENST00000246635 IFT140Q96RY7 1462 aa30.46■■■□□ 2.47
KRT13-201ENST00000246635 TARBP1Q13395 1621 aaKnown RBP30.45■■■□□ 2.46
KRT13-201ENST00000246635 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
KRT13-201ENST00000246635 TDRD9Q8NDG6 1382 aaKnown RBP30.37■■■□□ 2.45
KRT13-201ENST00000246635 WDR97A6NE52 1622 aa30.34■■■□□ 2.45
KRT13-201ENST00000246635 ZNF608Q9ULD9 1512 aaPredicted RBP30.33■■■□□ 2.45
KRT13-201ENST00000246635 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
KRT13-201ENST00000246635 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.45
KRT13-201ENST00000246635 KIF27Q86VH2 1401 aa30.29■■■□□ 2.44
KRT13-201ENST00000246635 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.44
KRT13-201ENST00000246635 GAPVD1Q14C86 1478 aa30.22■■■□□ 2.43
KRT13-201ENST00000246635 ABCA5Q8WWZ7 1642 aa30.2■■■□□ 2.42
KRT13-201ENST00000246635 EIF4G3O43432 1585 aaKnown RBP30.19■■■□□ 2.42
KRT13-201ENST00000246635 EEA1Q15075 1411 aa30.15■■■□□ 2.42
KRT13-201ENST00000246635 CSRNP3Q8WYN3 585 aa30.13■■■□□ 2.41
KRT13-201ENST00000246635 IGF1RP08069 1367 aa30.11■■■□□ 2.41
KRT13-201ENST00000246635 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
KRT13-201ENST00000246635 PBRM1Q86U86 1689 aa30.08■■■□□ 2.41
KRT13-201ENST00000246635 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
KRT13-201ENST00000246635 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
KRT13-201ENST00000246635 CARMIL1Q5VZK9 1371 aa29.96■■■□□ 2.39
KRT13-201ENST00000246635 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
KRT13-201ENST00000246635 CUL7Q14999 1698 aa29.9■■■□□ 2.38
KRT13-201ENST00000246635 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
KRT13-201ENST00000246635 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
KRT13-201ENST00000246635 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
KRT13-201ENST00000246635 FBLN2P98095 1184 aa29.87■■■□□ 2.37
KRT13-201ENST00000246635 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
KRT13-201ENST00000246635 CHMP7Q8WUX9 453 aaPredicted RBP29.84■■■□□ 2.37
KRT13-201ENST00000246635 RAPGEF2Q9Y4G8 1499 aa29.83■■■□□ 2.37
KRT13-201ENST00000246635 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
KRT13-201ENST00000246635 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
KRT13-201ENST00000246635 KIF21BO75037 1637 aa29.78■■■□□ 2.36
KRT13-201ENST00000246635 GOLGA3Q08378 1498 aa29.71■■■□□ 2.35
KRT13-201ENST00000246635 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
KRT13-201ENST00000246635 GRIN2AQ12879 1464 aa29.71■■■□□ 2.35
KRT13-201ENST00000246635 CHD1O14646 1710 aa29.69■■■□□ 2.34
KRT13-201ENST00000246635 CEP170Q5SW79 1584 aa29.53■■■□□ 2.32
KRT13-201ENST00000246635 NUP160Q12769 1436 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms