RNA–Protein interactions for RNA: ENST00000518030.1

SCARA5-203, Transcript of scavenger receptor class A member 5, humanhuman

TSL 1 (best) BASIC

Gene SCARA5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA5-203ENST00000518030 NISCHQ9Y2I1 1504 aa49.76■■■■■ 5.56
SCARA5-203ENST00000518030 ABCC9O60706 1549 aa44.8■■■■■ 4.76
SCARA5-203ENST00000518030 CCDC180Q9P1Z9 1646 aa44.58■■■■■ 4.73
SCARA5-203ENST00000518030 RB1CC1Q8TDY2 1594 aa42.56■■■■■ 4.4
SCARA5-203ENST00000518030 NACADO15069 1562 aa42.24■■■■■ 4.35
SCARA5-203ENST00000518030 DCAF8L2P0C7V8 631 aa42.21■■■■■ 4.35
SCARA5-203ENST00000518030 DNAJC5BQ9UF47 199 aa42.06■■■■■ 4.32
SCARA5-203ENST00000518030 PABPN1Q86U42 306 aaKnown RBP eCLIP41.76■■■■■ 4.28
SCARA5-203ENST00000518030 MYO15BQ96JP2 1530 aa41.62■■■■■ 4.25
SCARA5-203ENST00000518030 UNC13AQ9UPW8 1703 aa41.4■■■■■ 4.22
SCARA5-203ENST00000518030 ZCCHC6Q5VYS8 1495 aaKnown RBP41.29■■■■■ 4.2
SCARA5-203ENST00000518030 BICRAQ9NZM4 1560 aa41.25■■■■■ 4.19
SCARA5-203ENST00000518030 DCAF1Q9Y4B6 1507 aa41.07■■■■■ 4.16
SCARA5-203ENST00000518030 SHROOM4Q9ULL8 1493 aa40.76■■■■■ 4.12
SCARA5-203ENST00000518030 SCRIBQ14160 1630 aa40.73■■■■■ 4.11
SCARA5-203ENST00000518030 CC2D2AQ9P2K1 1620 aa40.38■■■■■ 4.06
SCARA5-203ENST00000518030 CECR2Q9BXF3 1484 aa40.36■■■■■ 4.05
SCARA5-203ENST00000518030 EIF4G1Q04637 1599 aaKnown RBP40.31■■■■■ 4.04
SCARA5-203ENST00000518030 NCAPD3P42695 1498 aa39.02■■■■□ 3.84
SCARA5-203ENST00000518030 ATAD2BQ9ULI0 1458 aa38.92■■■■□ 3.82
SCARA5-203ENST00000518030 SMARCA4P51532 1647 aa38.8■■■■□ 3.8
SCARA5-203ENST00000518030 SMARCA2P51531 1590 aa38.78■■■■□ 3.8
SCARA5-203ENST00000518030 ERCC6Q03468 1493 aa38.73■■■■□ 3.79
SCARA5-203ENST00000518030 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
SCARA5-203ENST00000518030 DNAJC5Q9H3Z4 198 aa38.68■■■■□ 3.78
SCARA5-203ENST00000518030 BAZ1AQ9NRL2 1556 aaPredicted RBP38.64■■■■□ 3.78
SCARA5-203ENST00000518030 CUX2O14529 1486 aa38.6■■■■□ 3.77
SCARA5-203ENST00000518030 BAZ1BQ9UIG0 1483 aaKnown RBP38.56■■■■□ 3.76
SCARA5-203ENST00000518030 NESP48681 1621 aa38.43■■■■□ 3.74
SCARA5-203ENST00000518030 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
SCARA5-203ENST00000518030 MROH2BQ7Z745 1585 aa38.36■■■■□ 3.73
SCARA5-203ENST00000518030 LAMC3Q9Y6N6 1575 aa38.12■■■■□ 3.69
SCARA5-203ENST00000518030 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
SCARA5-203ENST00000518030 THOC2Q8NI27 1593 aaKnown RBP37.98■■■■□ 3.67
SCARA5-203ENST00000518030 WIZO95785 1651 aa37.92■■■■□ 3.66
SCARA5-203ENST00000518030 CADPSQ9ULU8 1353 aa37.88■■■■□ 3.65
SCARA5-203ENST00000518030 KIF21AQ7Z4S6 1674 aa37.82■■■■□ 3.65
SCARA5-203ENST00000518030 RSF1Q96T23 1441 aaPredicted RBP37.73■■■■□ 3.63
SCARA5-203ENST00000518030 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
SCARA5-203ENST00000518030 WDR62O43379 1518 aa37.51■■■■□ 3.59
SCARA5-203ENST00000518030 CEP164Q9UPV0 1460 aa37.49■■■■□ 3.59
SCARA5-203ENST00000518030 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
SCARA5-203ENST00000518030 TOP2AP11388 1531 aaKnown RBP37.41■■■■□ 3.58
SCARA5-203ENST00000518030 CFTRP13569 1480 aa37.39■■■■□ 3.58
SCARA5-203ENST00000518030 URB2Q14146 1524 aaKnown RBP37.1■■■■□ 3.53
SCARA5-203ENST00000518030 TRIM41Q8WV44 630 aa37.05■■■■□ 3.52
SCARA5-203ENST00000518030 CCDC88BA6NC98 1476 aa37.02■■■■□ 3.52
SCARA5-203ENST00000518030 OSCARQ8IYS5 282 aa36.9■■■■□ 3.5
SCARA5-203ENST00000518030 PRDM2Q13029 1718 aa36.82■■■■□ 3.49
SCARA5-203ENST00000518030 IFT140Q96RY7 1462 aa36.75■■■■□ 3.47
SCARA5-203ENST00000518030 TOPBP1Q92547 1522 aa36.7■■■■□ 3.47
SCARA5-203ENST00000518030 ZNF608Q9ULD9 1512 aaPredicted RBP36.68■■■■□ 3.46
SCARA5-203ENST00000518030 ABCC8Q09428 1581 aa36.62■■■■□ 3.45
SCARA5-203ENST00000518030 DNMBPQ6XZF7 1577 aa36.54■■■■□ 3.44
SCARA5-203ENST00000518030 SUPT5HO00267 1087 aaKnown RBP36.43■■■■□ 3.42
SCARA5-203ENST00000518030 EIF4G3O43432 1585 aaKnown RBP36.42■■■■□ 3.42
SCARA5-203ENST00000518030 AQRO60306 1485 aaKnown RBP eCLIP36.36■■■■□ 3.41
SCARA5-203ENST00000518030 POLA1P09884 1462 aaPredicted RBP36.32■■■■□ 3.41
SCARA5-203ENST00000518030 RIMBP3CA6NJZ7 1639 aa36.31■■■■□ 3.4
SCARA5-203ENST00000518030 RIMBP3BA6NNM3 1639 aa36.31■■■■□ 3.4
SCARA5-203ENST00000518030 RIMBP3Q9UFD9 1639 aa36.31■■■■□ 3.4
SCARA5-203ENST00000518030 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
SCARA5-203ENST00000518030 ARHGEF11O15085 1522 aa36.24■■■■□ 3.39
SCARA5-203ENST00000518030 FBLN2P98095 1184 aa36.23■■■■□ 3.39
SCARA5-203ENST00000518030 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
SCARA5-203ENST00000518030 SOGA1O94964 1423 aa36.2■■■■□ 3.39
SCARA5-203ENST00000518030 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
SCARA5-203ENST00000518030 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
SCARA5-203ENST00000518030 CHD1O14646 1710 aa36.08■■■■□ 3.37
SCARA5-203ENST00000518030 CYB5RLQ6IPT4 315 aa36.07■■■■□ 3.36
SCARA5-203ENST00000518030 CUX1P39880 1505 aa36.03■■■■□ 3.36
SCARA5-203ENST00000518030 SNAPC4Q5SXM2 1469 aa35.99■■■■□ 3.35
SCARA5-203ENST00000518030 WDR97A6NE52 1622 aa35.94■■■■□ 3.34
SCARA5-203ENST00000518030 CHMP7Q8WUX9 453 aaPredicted RBP35.93■■■■□ 3.34
SCARA5-203ENST00000518030 GRIN2BQ13224 1484 aa35.88■■■■□ 3.33
SCARA5-203ENST00000518030 ARAP1Q96P48 1450 aa35.88■■■■□ 3.33
SCARA5-203ENST00000518030 MAGI1Q96QZ7 1491 aaPredicted RBP35.86■■■■□ 3.33
SCARA5-203ENST00000518030 SYNJ2O15056 1496 aa35.76■■■■□ 3.32
SCARA5-203ENST00000518030 SYNJ1O43426 1573 aa35.76■■■■□ 3.31
SCARA5-203ENST00000518030 GAPVD1Q14C86 1478 aa35.74■■■■□ 3.31
SCARA5-203ENST00000518030 CLASP1Q7Z460 1538 aa35.74■■■■□ 3.31
SCARA5-203ENST00000518030 TRHP20396 242 aaPredicted RBP35.73■■■■□ 3.31
SCARA5-203ENST00000518030 ABCA10Q8WWZ4 1543 aa35.67■■■■□ 3.3
SCARA5-203ENST00000518030 PBRM1Q86U86 1689 aa35.6■■■■□ 3.29
SCARA5-203ENST00000518030 WRNQ14191 1432 aaPredicted RBP eCLIP35.57■■■■□ 3.29
SCARA5-203ENST00000518030 ABCA5Q8WWZ7 1642 aa35.57■■■■□ 3.29
SCARA5-203ENST00000518030 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
SCARA5-203ENST00000518030 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
SCARA5-203ENST00000518030 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
SCARA5-203ENST00000518030 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
SCARA5-203ENST00000518030 FHAD1B1AJZ9 1412 aa35.31■■■■□ 3.24
SCARA5-203ENST00000518030 NUP160Q12769 1436 aa35.27■■■■□ 3.24
SCARA5-203ENST00000518030 CEP170Q5SW79 1584 aa35.24■■■■□ 3.23
SCARA5-203ENST00000518030 ERICH3Q5RHP9 1530 aa35.22■■■■□ 3.23
SCARA5-203ENST00000518030 ERCC6L2Q5T890 1561 aa35.2■■■■□ 3.23
SCARA5-203ENST00000518030 SHROOM2Q13796 1616 aa35.04■■■■□ 3.2
SCARA5-203ENST00000518030 PRG4Q92954 1404 aaPredicted RBP34.99■■■■□ 3.19
SCARA5-203ENST00000518030 JPH4Q96JJ6 628 aa34.98■■■■□ 3.19
SCARA5-203ENST00000518030 RUSC2Q8N2Y8 1516 aa34.84■■■■□ 3.17
SCARA5-203ENST00000518030 KIF27Q86VH2 1401 aa34.82■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms