Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 LETM1P2-201ENST00000597330 2178 ntBASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC23.42■■□□□ 1.34
PMFBP1Q8TBY8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 AC026471.1-201ENST00000564629 3026 ntBASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 LYSMD4-203ENST00000378904 2122 ntBASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 HLA-J-202ENST00000469281 1241 ntBASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PMFBP1Q8TBY8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 AC012569.1-201ENST00000591191 1524 ntBASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 AC005225.4-201ENST00000557330 545 ntBASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 AC008761.3-201ENST00000624803 892 ntBASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.4■■□□□ 1.34
PMFBP1Q8TBY8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 AC068880.1-201ENST00000507289 2297 ntBASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.39■■□□□ 1.34
PMFBP1Q8TBY8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 PPP6R2P1-201ENST00000450880 1275 ntBASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 AC097493.3-201ENST00000509725 367 ntBASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 LINC01451-201ENST00000623792 534 ntBASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.39■■□□□ 1.33
PMFBP1Q8TBY8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMFBP1Q8TBY8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMFBP1Q8TBY8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PMFBP1Q8TBY8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PMFBP1Q8TBY8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC23.38■■□□□ 1.33
PMFBP1Q8TBY8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms