RNA–Protein interactions for RNA: ENST00000512728.5

UVSSA-209, Transcript of UV stimulated scaffold protein A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UVSSA, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UVSSA-209ENST00000512728 NISCHQ9Y2I1 1504 aa39.83■■■■□ 3.97
UVSSA-209ENST00000512728 CCDC180Q9P1Z9 1646 aa35.19■■■■□ 3.22
UVSSA-209ENST00000512728 ABCC9O60706 1549 aa34.31■■■■□ 3.08
UVSSA-209ENST00000512728 ZCCHC6Q5VYS8 1495 aaKnown RBP33.53■■■□□ 2.96
UVSSA-209ENST00000512728 RB1CC1Q8TDY2 1594 aa33.01■■■□□ 2.87
UVSSA-209ENST00000512728 NACADO15069 1562 aa33■■■□□ 2.87
UVSSA-209ENST00000512728 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
UVSSA-209ENST00000512728 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
UVSSA-209ENST00000512728 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
UVSSA-209ENST00000512728 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
UVSSA-209ENST00000512728 UNC13AQ9UPW8 1703 aa32.45■■■□□ 2.78
UVSSA-209ENST00000512728 BICRAQ9NZM4 1560 aa32.16■■■□□ 2.74
UVSSA-209ENST00000512728 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
UVSSA-209ENST00000512728 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
UVSSA-209ENST00000512728 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
UVSSA-209ENST00000512728 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
UVSSA-209ENST00000512728 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
UVSSA-209ENST00000512728 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
UVSSA-209ENST00000512728 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
UVSSA-209ENST00000512728 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
UVSSA-209ENST00000512728 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
UVSSA-209ENST00000512728 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.51
UVSSA-209ENST00000512728 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
UVSSA-209ENST00000512728 WIZO95785 1651 aa30.57■■■□□ 2.48
UVSSA-209ENST00000512728 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
UVSSA-209ENST00000512728 NCAPD3P42695 1498 aa30.46■■■□□ 2.47
UVSSA-209ENST00000512728 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.46
UVSSA-209ENST00000512728 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
UVSSA-209ENST00000512728 HMGXB3Q12766 1538 aa30.35■■■□□ 2.45
UVSSA-209ENST00000512728 TOP2AP11388 1531 aaKnown RBP30.29■■■□□ 2.44
UVSSA-209ENST00000512728 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
UVSSA-209ENST00000512728 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
UVSSA-209ENST00000512728 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
UVSSA-209ENST00000512728 NESP48681 1621 aa29.78■■■□□ 2.36
UVSSA-209ENST00000512728 LAMC3Q9Y6N6 1575 aa29.65■■■□□ 2.34
UVSSA-209ENST00000512728 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
UVSSA-209ENST00000512728 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
UVSSA-209ENST00000512728 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
UVSSA-209ENST00000512728 KIF21AQ7Z4S6 1674 aa29.46■■■□□ 2.31
UVSSA-209ENST00000512728 CFTRP13569 1480 aa29.44■■■□□ 2.3
UVSSA-209ENST00000512728 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
UVSSA-209ENST00000512728 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
UVSSA-209ENST00000512728 THOC2Q8NI27 1593 aaKnown RBP29.34■■■□□ 2.29
UVSSA-209ENST00000512728 PRDM2Q13029 1718 aa29.29■■■□□ 2.28
UVSSA-209ENST00000512728 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
UVSSA-209ENST00000512728 CUX2O14529 1486 aa29.19■■■□□ 2.26
UVSSA-209ENST00000512728 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
UVSSA-209ENST00000512728 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
UVSSA-209ENST00000512728 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
UVSSA-209ENST00000512728 WDR62O43379 1518 aa29.09■■■□□ 2.25
UVSSA-209ENST00000512728 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
UVSSA-209ENST00000512728 SYNJ1O43426 1573 aa29.06■■■□□ 2.24
UVSSA-209ENST00000512728 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
UVSSA-209ENST00000512728 URB2Q14146 1524 aaKnown RBP29■■■□□ 2.23
UVSSA-209ENST00000512728 TOP2BQ02880 1626 aa28.95■■■□□ 2.22
UVSSA-209ENST00000512728 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
UVSSA-209ENST00000512728 EEA1Q15075 1411 aa28.94■■■□□ 2.22
UVSSA-209ENST00000512728 SOGA1O94964 1423 aa28.82■■■□□ 2.2
UVSSA-209ENST00000512728 TOPBP1Q92547 1522 aa28.8■■■□□ 2.2
UVSSA-209ENST00000512728 DNMBPQ6XZF7 1577 aa28.77■■■□□ 2.2
UVSSA-209ENST00000512728 CUX1P39880 1505 aa28.77■■■□□ 2.2
UVSSA-209ENST00000512728 RUSC2Q8N2Y8 1516 aa28.68■■■□□ 2.18
UVSSA-209ENST00000512728 CSRNP3Q8WYN3 585 aa28.65■■■□□ 2.18
UVSSA-209ENST00000512728 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.17
UVSSA-209ENST00000512728 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
UVSSA-209ENST00000512728 KIF21BO75037 1637 aa28.56■■■□□ 2.16
UVSSA-209ENST00000512728 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
UVSSA-209ENST00000512728 GOLGA3Q08378 1498 aa28.54■■■□□ 2.16
UVSSA-209ENST00000512728 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
UVSSA-209ENST00000512728 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
UVSSA-209ENST00000512728 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
UVSSA-209ENST00000512728 RAD54L2Q9Y4B4 1467 aa28.45■■■□□ 2.15
UVSSA-209ENST00000512728 KIF27Q86VH2 1401 aa28.45■■■□□ 2.14
UVSSA-209ENST00000512728 TNIKQ9UKE5 1360 aa28.43■■■□□ 2.14
UVSSA-209ENST00000512728 EIF4G3O43432 1585 aaKnown RBP28.4■■■□□ 2.14
UVSSA-209ENST00000512728 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
UVSSA-209ENST00000512728 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
UVSSA-209ENST00000512728 ERICH3Q5RHP9 1530 aa28.32■■■□□ 2.12
UVSSA-209ENST00000512728 CEP162Q5TB80 1403 aa28.32■■■□□ 2.12
UVSSA-209ENST00000512728 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.122e-7■■□□□ 12.5
UVSSA-209ENST00000512728 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.11
UVSSA-209ENST00000512728 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
UVSSA-209ENST00000512728 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
UVSSA-209ENST00000512728 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
UVSSA-209ENST00000512728 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
UVSSA-209ENST00000512728 ABCA5Q8WWZ7 1642 aa28.17■■■□□ 2.1
UVSSA-209ENST00000512728 PBRM1Q86U86 1689 aa28.11■■■□□ 2.09
UVSSA-209ENST00000512728 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
UVSSA-209ENST00000512728 IGF1RP08069 1367 aa28.06■■■□□ 2.08
UVSSA-209ENST00000512728 CLIP1P30622 1438 aa28.06■■■□□ 2.08
UVSSA-209ENST00000512728 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
UVSSA-209ENST00000512728 CHD1O14646 1710 aa28.05■■■□□ 2.08
UVSSA-209ENST00000512728 SNAPC4Q5SXM2 1469 aa28.04■■■□□ 2.08
UVSSA-209ENST00000512728 CUL7Q14999 1698 aa28.01■■■□□ 2.08
UVSSA-209ENST00000512728 PCGF6Q9BYE7 350 aa28.01■■■□□ 2.07
UVSSA-209ENST00000512728 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
UVSSA-209ENST00000512728 MAGI1Q96QZ7 1491 aaPredicted RBP27.98■■■□□ 2.07
UVSSA-209ENST00000512728 CARMIL1Q5VZK9 1371 aa27.98■■■□□ 2.07
UVSSA-209ENST00000512728 OSCARQ8IYS5 282 aa27.91■■■□□ 2.06
UVSSA-209ENST00000512728 SYNJ2O15056 1496 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms