RNA–Protein interactions for RNA: ENST00000473000.2

PSMG4-209, Transcript of proteasome assembly chaperone 4, humanhuman

TSL 2 BASIC

Gene PSMG4, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMG4-209ENST00000473000 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
PSMG4-209ENST00000473000 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
PSMG4-209ENST00000473000 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
PSMG4-209ENST00000473000 SUPT5HO00267 1087 aaKnown RBP31.45■■■□□ 2.63
PSMG4-209ENST00000473000 EHMT2Q96KQ7 1210 aa29.65■■■□□ 2.34
PSMG4-209ENST00000473000 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
PSMG4-209ENST00000473000 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
PSMG4-209ENST00000473000 PCGF6Q9BYE7 350 aa29.04■■■□□ 2.24
PSMG4-209ENST00000473000 ABCC9O60706 1549 aa28.98■■■□□ 2.23
PSMG4-209ENST00000473000 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
PSMG4-209ENST00000473000 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
PSMG4-209ENST00000473000 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
PSMG4-209ENST00000473000 APLP2Q06481 763 aa28.74■■■□□ 2.19
PSMG4-209ENST00000473000 TTBK1Q5TCY1 1321 aaPredicted RBP28.6■■■□□ 2.17
PSMG4-209ENST00000473000 LOC105371045A0A1W2PR82 267 aa28.53■■■□□ 2.16
PSMG4-209ENST00000473000 UBTFP17480 764 aaKnown RBP28.49■■■□□ 2.15
PSMG4-209ENST00000473000 RANGAP1P46060 587 aaPredicted RBP28.42■■■□□ 2.14
PSMG4-209ENST00000473000 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
PSMG4-209ENST00000473000 ZEB1P37275 1124 aaPredicted RBP28.22■■■□□ 2.11
PSMG4-209ENST00000473000 TRIM26Q12899 539 aaPredicted RBP28.2■■■□□ 2.11
PSMG4-209ENST00000473000 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
PSMG4-209ENST00000473000 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
PSMG4-209ENST00000473000 CCER1Q8TC90 406 aaPredicted RBP28.11■■■□□ 2.09
PSMG4-209ENST00000473000 HRCP23327 699 aa27.96■■■□□ 2.07
PSMG4-209ENST00000473000 ATP1B4Q9UN42 357 aaPredicted RBP27.9■■■□□ 2.06
PSMG4-209ENST00000473000 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
PSMG4-209ENST00000473000 NACADO15069 1562 aa27.61■■■□□ 2.01
PSMG4-209ENST00000473000 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
PSMG4-209ENST00000473000 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
PSMG4-209ENST00000473000 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
PSMG4-209ENST00000473000 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
PSMG4-209ENST00000473000 CENPBP07199 599 aaPredicted RBP27.32■■□□□ 1.96
PSMG4-209ENST00000473000 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
PSMG4-209ENST00000473000 ITGAEP38570 1179 aa27.3■■□□□ 1.96
PSMG4-209ENST00000473000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
PSMG4-209ENST00000473000 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
PSMG4-209ENST00000473000 PELP1Q8IZL8 1130 aaKnown RBP27.16■■□□□ 1.94
PSMG4-209ENST00000473000 BAZ1AQ9NRL2 1556 aaPredicted RBP27.02■■□□□ 1.92
PSMG4-209ENST00000473000 YTHDC1Q96MU7 727 aaKnown RBP26.97■■□□□ 1.91
PSMG4-209ENST00000473000 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
PSMG4-209ENST00000473000 FAM50AQ14320 339 aaKnown RBP26.83■■□□□ 1.89
PSMG4-209ENST00000473000 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
PSMG4-209ENST00000473000 DIEXFQ68CQ4 756 aaKnown RBP26.74■■□□□ 1.87
PSMG4-209ENST00000473000 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
PSMG4-209ENST00000473000 P3H3Q8IVL6 736 aa26.72■■□□□ 1.87
PSMG4-209ENST00000473000 EEA1Q15075 1411 aa26.7■■□□□ 1.86
PSMG4-209ENST00000473000 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
PSMG4-209ENST00000473000 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
PSMG4-209ENST00000473000 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
PSMG4-209ENST00000473000 CLIP1P30622 1438 aa26.53■■□□□ 1.84
PSMG4-209ENST00000473000 WIZO95785 1651 aa26.52■■□□□ 1.84
PSMG4-209ENST00000473000 FBLN2P98095 1184 aa26.5■■□□□ 1.83
PSMG4-209ENST00000473000 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
PSMG4-209ENST00000473000 NEUROD1Q13562 356 aa26.46■■□□□ 1.83
PSMG4-209ENST00000473000 NEFLP07196 543 aa26.43■■□□□ 1.82
PSMG4-209ENST00000473000 TRIM52Q96A61 297 aa26.41■■□□□ 1.82
PSMG4-209ENST00000473000 ZNF316A6NFI3 1004 aaPredicted RBP26.41■■□□□ 1.82
PSMG4-209ENST00000473000 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
PSMG4-209ENST00000473000 SOGA1O94964 1423 aa26.38■■□□□ 1.81
PSMG4-209ENST00000473000 MYT1LQ9UL68 1186 aa26.36■■□□□ 1.81
PSMG4-209ENST00000473000 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
PSMG4-209ENST00000473000 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
PSMG4-209ENST00000473000 ARID3CA6NKF2 412 aa26.33■■□□□ 1.81
PSMG4-209ENST00000473000 POLR3GLQ9BT43 218 aa26.31■■□□□ 1.8
PSMG4-209ENST00000473000 KIF27Q86VH2 1401 aa26.3■■□□□ 1.8
PSMG4-209ENST00000473000 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
PSMG4-209ENST00000473000 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
PSMG4-209ENST00000473000 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
PSMG4-209ENST00000473000 CDK11AQ9UQ88 783 aaPredicted RBP26.12■■□□□ 1.77
PSMG4-209ENST00000473000 CNGB1Q14028 1251 aaPredicted RBP26.09■■□□□ 1.77
PSMG4-209ENST00000473000 ZNF777Q9ULD5 760 aaPredicted RBP26■■□□□ 1.75
PSMG4-209ENST00000473000 MTUS2Q5JR59 1369 aa26■■□□□ 1.75
PSMG4-209ENST00000473000 CUX2O14529 1486 aa25.97■■□□□ 1.75
PSMG4-209ENST00000473000 ZNF326Q5BKZ1 582 aaKnown RBP25.93■■□□□ 1.74
PSMG4-209ENST00000473000 ANP32CO43423 234 aa25.92■■□□□ 1.74
PSMG4-209ENST00000473000 GTF3C3Q9Y5Q9 886 aa25.92■■□□□ 1.74
PSMG4-209ENST00000473000 CARMIL1Q5VZK9 1371 aa25.91■■□□□ 1.74
PSMG4-209ENST00000473000 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.73
PSMG4-209ENST00000473000 ERICH6Q7L0X2 663 aa25.87■■□□□ 1.73
PSMG4-209ENST00000473000 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
PSMG4-209ENST00000473000 CHIC2Q9UKJ5 165 aa25.86■■□□□ 1.73
PSMG4-209ENST00000473000 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
PSMG4-209ENST00000473000 TONSLQ96HA7 1378 aa25.85■■□□□ 1.73
PSMG4-209ENST00000473000 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
PSMG4-209ENST00000473000 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
PSMG4-209ENST00000473000 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
PSMG4-209ENST00000473000 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
PSMG4-209ENST00000473000 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
PSMG4-209ENST00000473000 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
PSMG4-209ENST00000473000 KANK4Q5T7N3 995 aaPredicted RBP25.64■■□□□ 1.7
PSMG4-209ENST00000473000 RRP7BPQ9NSQ0 103 aa25.63■■□□□ 1.69
PSMG4-209ENST00000473000 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
PSMG4-209ENST00000473000 MIER1Q8N108 512 aa25.58■■□□□ 1.69
PSMG4-209ENST00000473000 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
PSMG4-209ENST00000473000 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
PSMG4-209ENST00000473000 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
PSMG4-209ENST00000473000 SLC4A1APQ9BWU0 796 aaKnown RBP25.56■■□□□ 1.68
PSMG4-209ENST00000473000 TSPY4P0CV99 314 aa25.55■■□□□ 1.68
PSMG4-209ENST00000473000 TSPY10P0CW01 314 aa25.55■■□□□ 1.68
PSMG4-209ENST00000473000 CLSPNQ9HAW4 1339 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms