RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
LYSMD4-203ENST00000378904 CCDC180Q9P1Z9 1646 aa34.79■■■■□ 3.16
LYSMD4-203ENST00000378904 ZCCHC6Q5VYS8 1495 aaKnown RBP33.47■■■□□ 2.95
LYSMD4-203ENST00000378904 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
LYSMD4-203ENST00000378904 DCAF1Q9Y4B6 1507 aa32.93■■■□□ 2.86
LYSMD4-203ENST00000378904 ABCC9O60706 1549 aa32.92■■■□□ 2.86
LYSMD4-203ENST00000378904 MYO15BQ96JP2 1530 aa32.55■■■□□ 2.8
LYSMD4-203ENST00000378904 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
LYSMD4-203ENST00000378904 NACADO15069 1562 aa32.38■■■□□ 2.77
LYSMD4-203ENST00000378904 RB1CC1Q8TDY2 1594 aa32.13■■■□□ 2.73
LYSMD4-203ENST00000378904 SCRIBQ14160 1630 aa32■■■□□ 2.71
LYSMD4-203ENST00000378904 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
LYSMD4-203ENST00000378904 SUPT5HO00267 1087 aaKnown RBP31.25■■■□□ 2.59
LYSMD4-203ENST00000378904 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
LYSMD4-203ENST00000378904 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
LYSMD4-203ENST00000378904 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
LYSMD4-203ENST00000378904 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
LYSMD4-203ENST00000378904 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
LYSMD4-203ENST00000378904 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
LYSMD4-203ENST00000378904 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
LYSMD4-203ENST00000378904 WIZO95785 1651 aa30.58■■■□□ 2.49
LYSMD4-203ENST00000378904 PEG3Q9GZU2 1588 aa30.27■■■□□ 2.44
LYSMD4-203ENST00000378904 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
LYSMD4-203ENST00000378904 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
LYSMD4-203ENST00000378904 ATAD2BQ9ULI0 1458 aa30.14■■■□□ 2.42
LYSMD4-203ENST00000378904 SMARCA2P51531 1590 aa30.12■■■□□ 2.41
LYSMD4-203ENST00000378904 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
LYSMD4-203ENST00000378904 CCDC88BA6NC98 1476 aa29.92■■■□□ 2.38
LYSMD4-203ENST00000378904 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.37
LYSMD4-203ENST00000378904 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
LYSMD4-203ENST00000378904 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
LYSMD4-203ENST00000378904 CC2D2AQ9P2K1 1620 aa29.8■■■□□ 2.36
LYSMD4-203ENST00000378904 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
LYSMD4-203ENST00000378904 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
LYSMD4-203ENST00000378904 CFTRP13569 1480 aa29.21■■■□□ 2.27
LYSMD4-203ENST00000378904 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
LYSMD4-203ENST00000378904 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
LYSMD4-203ENST00000378904 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
LYSMD4-203ENST00000378904 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
LYSMD4-203ENST00000378904 SYNJ1O43426 1573 aa29■■■□□ 2.23
LYSMD4-203ENST00000378904 NESP48681 1621 aa28.9■■■□□ 2.22
LYSMD4-203ENST00000378904 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.22
LYSMD4-203ENST00000378904 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
LYSMD4-203ENST00000378904 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
LYSMD4-203ENST00000378904 FAM9AQ8IZU1 332 aaPredicted RBP28.85■■■□□ 2.21
LYSMD4-203ENST00000378904 FANCD2Q9BXW9 1451 aa28.81■■■□□ 2.2
LYSMD4-203ENST00000378904 CUX1P39880 1505 aa28.8■■■□□ 2.2
LYSMD4-203ENST00000378904 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
LYSMD4-203ENST00000378904 SOGA1O94964 1423 aa28.73■■■□□ 2.19
LYSMD4-203ENST00000378904 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
LYSMD4-203ENST00000378904 EEA1Q15075 1411 aa28.64■■■□□ 2.17
LYSMD4-203ENST00000378904 RUSC2Q8N2Y8 1516 aa28.63■■■□□ 2.17
LYSMD4-203ENST00000378904 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
LYSMD4-203ENST00000378904 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
LYSMD4-203ENST00000378904 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
LYSMD4-203ENST00000378904 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
LYSMD4-203ENST00000378904 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
LYSMD4-203ENST00000378904 CSRNP3Q8WYN3 585 aa28.49■■■□□ 2.15
LYSMD4-203ENST00000378904 EHMT2Q96KQ7 1210 aa28.46■■■□□ 2.15
LYSMD4-203ENST00000378904 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
LYSMD4-203ENST00000378904 POLA1P09884 1462 aaPredicted RBP28.35■■■□□ 2.13
LYSMD4-203ENST00000378904 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
LYSMD4-203ENST00000378904 KIF21BO75037 1637 aa28.3■■■□□ 2.12
LYSMD4-203ENST00000378904 CUX2O14529 1486 aa28.29■■■□□ 2.12
LYSMD4-203ENST00000378904 MRC2Q9UBG0 1479 aa28.29■■■□□ 2.12
LYSMD4-203ENST00000378904 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
LYSMD4-203ENST00000378904 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
LYSMD4-203ENST00000378904 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
LYSMD4-203ENST00000378904 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
LYSMD4-203ENST00000378904 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
LYSMD4-203ENST00000378904 WDR62O43379 1518 aa28.15■■■□□ 2.1
LYSMD4-203ENST00000378904 PRXQ9BXM0 1461 aa28.15■■■□□ 2.1
LYSMD4-203ENST00000378904 TNIKQ9UKE5 1360 aa28.15■■■□□ 2.1
LYSMD4-203ENST00000378904 RAPGEF2Q9Y4G8 1499 aa28.14■■■□□ 2.1
LYSMD4-203ENST00000378904 UBTFP17480 764 aaKnown RBP28.13■■■□□ 2.09
LYSMD4-203ENST00000378904 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
LYSMD4-203ENST00000378904 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
LYSMD4-203ENST00000378904 IGF1RP08069 1367 aa28.1■■■□□ 2.09
LYSMD4-203ENST00000378904 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
LYSMD4-203ENST00000378904 ABCA5Q8WWZ7 1642 aa28.02■■■□□ 2.08
LYSMD4-203ENST00000378904 CEP162Q5TB80 1403 aa28.01■■■□□ 2.07
LYSMD4-203ENST00000378904 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
LYSMD4-203ENST00000378904 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
LYSMD4-203ENST00000378904 GAPVD1Q14C86 1478 aa27.94■■■□□ 2.06
LYSMD4-203ENST00000378904 IFT140Q96RY7 1462 aa27.93■■■□□ 2.06
LYSMD4-203ENST00000378904 CUL7Q14999 1698 aa27.92■■■□□ 2.06
LYSMD4-203ENST00000378904 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
LYSMD4-203ENST00000378904 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.04
LYSMD4-203ENST00000378904 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
LYSMD4-203ENST00000378904 CLIP1P30622 1438 aa27.8■■■□□ 2.04
LYSMD4-203ENST00000378904 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
LYSMD4-203ENST00000378904 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
LYSMD4-203ENST00000378904 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
LYSMD4-203ENST00000378904 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
LYSMD4-203ENST00000378904 CTTNBP2Q8WZ74 1663 aa27.64■■■□□ 2.02
LYSMD4-203ENST00000378904 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
LYSMD4-203ENST00000378904 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
LYSMD4-203ENST00000378904 VPS8Q8N3P4 1428 aa27.56■■■□□ 2
LYSMD4-203ENST00000378904 ARAP1Q96P48 1450 aa27.55■■■□□ 2
LYSMD4-203ENST00000378904 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms