Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.785e-9■■□□□ 13.5
XRN2Q9H0D6 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.55e-9■■□□□ 13.5
XRN2Q9H0D6 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.42□□□□□ -1.223e-6■■□□□ 13.5
XRN2Q9H0D6 PVT1-217ENST00000523190 443 ntTSL 37.31□□□□□ -1.243e-6■■□□□ 13.5
XRN2Q9H0D6 PVT1-211ENST00000521600 408 ntTSL 24.63□□□□□ -1.673e-6■■□□□ 13.5
XRN2Q9H0D6 PVT1-202ENST00000512617 383 ntTSL 33.43□□□□□ -1.863e-6■■□□□ 13.5
XRN2Q9H0D6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.292e-6■■□□□ 13.5
XRN2Q9H0D6 MTA1-209ENST00000469140 1666 ntTSL 525.81■■□□□ 1.724e-15■■□□□ 13.5
XRN2Q9H0D6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.52■■■□□ 2.649e-47■■□□□ 13.5
XRN2Q9H0D6 TRAF4-211ENST00000478021 718 ntTSL 326.81■■□□□ 1.883e-7■■□□□ 13.5
XRN2Q9H0D6 PKP4-207ENST00000457109 520 ntTSL 310.7□□□□□ -0.74e-7■■□□□ 13.5
XRN2Q9H0D6 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.714e-7■■□□□ 13.5
XRN2Q9H0D6 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.054e-7■■□□□ 13.5
XRN2Q9H0D6 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.58□□□□□ -1.24e-7■■□□□ 13.5
XRN2Q9H0D6 SAMD4B-206ENST00000596368 1176 ntTSL 5 BASIC13.29□□□□□ -0.282e-8■■□□□ 13.5
XRN2Q9H0D6 TCF20-204ENST00000515426 633 ntTSL 520.67■□□□□ 0.91e-8■■□□□ 13.4
XRN2Q9H0D6 PCNX3-204ENST00000531045 266 ntTSL 319.99■□□□□ 0.799e-8■■□□□ 13.4
XRN2Q9H0D6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.887e-7■■□□□ 13.4
XRN2Q9H0D6 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.82□□□□□ -1.327e-7■■□□□ 13.4
XRN2Q9H0D6 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC9.78□□□□□ -0.848e-7■■□□□ 13.4
XRN2Q9H0D6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.573e-6■■□□□ 13.4
XRN2Q9H0D6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.14■■□□□ 1.133e-6■■□□□ 13.4
XRN2Q9H0D6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.973e-6■■□□□ 13.4
XRN2Q9H0D6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.27■□□□□ 0.845e-9■■□□□ 13.4
XRN2Q9H0D6 ZNF276-204ENST00000562530 1826 ntTSL 218.07■□□□□ 0.485e-9■■□□□ 13.4
XRN2Q9H0D6 D2HGDH-212ENST00000468064 2298 ntTSL 1 (best)23.14■■□□□ 1.293e-6■■□□□ 13.4
XRN2Q9H0D6 D2HGDH-208ENST00000445308 955 ntTSL 222.94■■□□□ 1.263e-6■■□□□ 13.4
XRN2Q9H0D6 CMIP-207ENST00000565680 556 ntTSL 417.98■□□□□ 0.475e-6■■□□□ 13.4
XRN2Q9H0D6 CMIP-210ENST00000569146 1589 ntTSL 515.69■□□□□ 0.15e-6■■□□□ 13.4
XRN2Q9H0D6 SPHK1-209ENST00000591762 2502 ntTSL 217.84■□□□□ 0.451e-6■■□□□ 13.4
XRN2Q9H0D6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.08■□□□□ 0.334e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-217ENST00000555116 1885 ntTSL 216.51■□□□□ 0.234e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-231ENST00000557433 1904 ntTSL 1 (best)15.95■□□□□ 0.144e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.95■□□□□ 0.144e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.67■□□□□ 0.14e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-222ENST00000555774 2311 ntTSL 1 (best)13.47□□□□□ -0.254e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC13.24□□□□□ -0.294e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-229ENST00000557348 1659 ntTSL 213.18□□□□□ -0.34e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-226ENST00000556825 2215 ntTSL 1 (best)13.17□□□□□ -0.34e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-207ENST00000553837 2152 ntTSL 512.09□□□□□ -0.474e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-212ENST00000554467 3416 ntTSL 212.01□□□□□ -0.494e-7■■□□□ 13.4
XRN2Q9H0D6 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.614e-7■■□□□ 13.4
XRN2Q9H0D6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.662e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.032e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.32e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-205ENST00000572105 1168 ntTSL 516.22■□□□□ 0.192e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.132e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-214ENST00000576544 1720 ntTSL 514.12□□□□□ -0.152e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-215ENST00000576917 1958 ntTSL 513.98□□□□□ -0.172e-8■■□□□ 13.4
XRN2Q9H0D6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.232e-8■■□□□ 13.4
XRN2Q9H0D6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.676e-8■■□□□ 13.4
XRN2Q9H0D6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.486e-8■■□□□ 13.4
XRN2Q9H0D6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.76□□□□□ -0.211e-6■■□□□ 13.3
XRN2Q9H0D6 CDC34-206ENST00000606400 899 ntTSL 221.32■■□□□ 11e-20■■□□□ 13.3
XRN2Q9H0D6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.751e-6■■□□□ 13.3
XRN2Q9H0D6 CDC34-204ENST00000593036 359 ntTSL 318.19■□□□□ 0.51e-20■■□□□ 13.3
XRN2Q9H0D6 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.881e-6■■□□□ 13.3
XRN2Q9H0D6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.511e-6■■□□□ 13.3
XRN2Q9H0D6 SUB1-205ENST00000504789 570 ntTSL 423.38■■□□□ 1.332e-19■■□□□ 13.3
XRN2Q9H0D6 SEPT9-238ENST00000591472 555 ntTSL 413.62□□□□□ -0.232e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-222ENST00000533376 496 ntTSL 529.49■■■□□ 2.318e-6■■□□□ 13.3
XRN2Q9H0D6 PIK3CB-202ENST00000461451 667 ntTSL 228.75■■■□□ 2.194e-6■■□□□ 13.3
XRN2Q9H0D6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.058e-6■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-208ENST00000537143 519 ntTSL 227.45■■□□□ 1.988e-6■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-219ENST00000542908 1178 ntTSL 227.45■■□□□ 1.988e-6■■□□□ 13.3
XRN2Q9H0D6 PIK3CB-210ENST00000483968 721 ntTSL 327.08■■□□□ 1.934e-6■■□□□ 13.3
XRN2Q9H0D6 CLIC4-204ENST00000497755 672 ntTSL 326.81■■□□□ 1.885e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-222ENST00000522870 1599 ntTSL 526.45■■□□□ 1.828e-6■■□□□ 13.3
XRN2Q9H0D6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.798e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.1■■□□□ 1.778e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-214ENST00000521314 1555 ntTSL 525.9■■□□□ 1.748e-6■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.55■■□□□ 1.688e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-203ENST00000517685 1249 ntTSL 525.19■■□□□ 1.628e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-220ENST00000522295 1539 ntTSL 524.76■■□□□ 1.558e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-201ENST00000434833 1568 ntTSL 1 (best)24.54■■□□□ 1.528e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-224ENST00000523562 1839 ntTSL 224.51■■□□□ 1.518e-6■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.488e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.458e-6■■□□□ 13.3
XRN2Q9H0D6 ARF4-202ENST00000463880 641 ntTSL 324.02■■□□□ 1.448e-6■■□□□ 13.3
XRN2Q9H0D6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.398e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-216ENST00000521624 1358 ntTSL 1 (best)23.41■■□□□ 1.348e-6■■□□□ 13.3
XRN2Q9H0D6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.34■■□□□ 1.338e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-218ENST00000441124 708 ntTSL 223.3■■□□□ 1.322e-10■■□□□ 13.3
XRN2Q9H0D6 HSF4-204ENST00000517729 556 ntTSL 523.04■■□□□ 1.288e-6■■□□□ 13.3
XRN2Q9H0D6 ZYX-205ENST00000446634 926 ntTSL 522.94■■□□□ 1.268e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-223ENST00000534215 568 ntTSL 422.94■■□□□ 1.268e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-218ENST00000522023 636 ntTSL 422.47■■□□□ 1.198e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-212ENST00000527674 1785 ntTSL 222.4■■□□□ 1.188e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-210ENST00000525434 582 ntTSL 522.31■■□□□ 1.168e-6■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-202ENST00000435507 2254 ntTSL 221.97■■□□□ 1.118e-6■■□□□ 13.3
XRN2Q9H0D6 ZYX-204ENST00000436448 632 ntTSL 421.74■■□□□ 1.078e-6■■□□□ 13.3
XRN2Q9H0D6 MXRA8-206ENST00000473097 975 ntTSL 321.64■■□□□ 1.058e-6■■□□□ 13.3
XRN2Q9H0D6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.038e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-208ENST00000422080 578 ntTSL 321.29■■□□□ 12e-10■■□□□ 13.3
XRN2Q9H0D6 HDLBP-212ENST00000426343 594 ntTSL 421.29■■□□□ 12e-10■■□□□ 13.3
XRN2Q9H0D6 HDLBP-244ENST00000490697 581 ntTSL 421.29■■□□□ 12e-10■■□□□ 13.3
XRN2Q9H0D6 ARFRP1-205ENST00000610414 1251 ntTSL 220.89■□□□□ 0.932e-11■■□□□ 13.3
XRN2Q9H0D6 ARFRP1-203ENST00000609188 225 ntTSL 520.35■□□□□ 0.852e-11■■□□□ 13.3
XRN2Q9H0D6 ARFRP1-209ENST00000612772 1375 ntTSL 320.16■□□□□ 0.822e-11■■□□□ 13.3
XRN2Q9H0D6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.728e-6■■□□□ 13.3
Retrieved 100 of 21,068 protein–RNA pairs in 152.4 ms