RNA–Protein interactions for RNA: ENST00000531045.1

PCNX3-204, Transcript of pecanex 3, humanhuman

TSL 3

Gene PCNX3, Length 266 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-204ENST00000531045 NISCHQ9Y2I1 1504 aa41.67■■■■■ 4.26
PCNX3-204ENST00000531045 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
PCNX3-204ENST00000531045 ABCC9O60706 1549 aa36.8■■■■□ 3.48
PCNX3-204ENST00000531045 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
PCNX3-204ENST00000531045 NACADO15069 1562 aa35.04■■■■□ 3.2
PCNX3-204ENST00000531045 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
PCNX3-204ENST00000531045 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.16
PCNX3-204ENST00000531045 ZCCHC6Q5VYS8 1495 aaKnown RBP34.63■■■■□ 3.13
PCNX3-204ENST00000531045 DCAF1Q9Y4B6 1507 aa34.46■■■■□ 3.11
PCNX3-204ENST00000531045 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
PCNX3-204ENST00000531045 DNAJC5BQ9UF47 199 aa34.36■■■■□ 3.09
PCNX3-204ENST00000531045 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
PCNX3-204ENST00000531045 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
PCNX3-204ENST00000531045 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
PCNX3-204ENST00000531045 SHROOM4Q9ULL8 1493 aa33.73■■■□□ 2.99
PCNX3-204ENST00000531045 EIF4G1Q04637 1599 aaKnown RBP33.31■■■□□ 2.92
PCNX3-204ENST00000531045 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
PCNX3-204ENST00000531045 CECR2Q9BXF3 1484 aa33.1■■■□□ 2.89
PCNX3-204ENST00000531045 NCAPD3P42695 1498 aa32.42■■■□□ 2.78
PCNX3-204ENST00000531045 SMARCA4P51532 1647 aa32.39■■■□□ 2.78
PCNX3-204ENST00000531045 ATAD2BQ9ULI0 1458 aa32.37■■■□□ 2.77
PCNX3-204ENST00000531045 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
PCNX3-204ENST00000531045 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
PCNX3-204ENST00000531045 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
PCNX3-204ENST00000531045 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
PCNX3-204ENST00000531045 PEG3Q9GZU2 1588 aa32.14■■■□□ 2.74
PCNX3-204ENST00000531045 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
PCNX3-204ENST00000531045 NESP48681 1621 aa31.78■■■□□ 2.68
PCNX3-204ENST00000531045 WIZO95785 1651 aa31.72■■■□□ 2.67
PCNX3-204ENST00000531045 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
PCNX3-204ENST00000531045 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
PCNX3-204ENST00000531045 CUX2O14529 1486 aa31.53■■■□□ 2.64
PCNX3-204ENST00000531045 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
PCNX3-204ENST00000531045 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
PCNX3-204ENST00000531045 THOC2Q8NI27 1593 aaKnown RBP31.36■■■□□ 2.61
PCNX3-204ENST00000531045 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
PCNX3-204ENST00000531045 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.6
PCNX3-204ENST00000531045 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
PCNX3-204ENST00000531045 CFTRP13569 1480 aa31.17■■■□□ 2.58
PCNX3-204ENST00000531045 DNAJC5Q9H3Z4 198 aa31.15■■■□□ 2.58
PCNX3-204ENST00000531045 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
PCNX3-204ENST00000531045 CCDC88BA6NC98 1476 aa31.02■■■□□ 2.56
PCNX3-204ENST00000531045 FANCD2Q9BXW9 1451 aa31.02■■■□□ 2.56
PCNX3-204ENST00000531045 WDR62O43379 1518 aa31.02■■■□□ 2.56
PCNX3-204ENST00000531045 CEP164Q9UPV0 1460 aa30.97■■■□□ 2.55
PCNX3-204ENST00000531045 URB2Q14146 1524 aaKnown RBP30.82■■■□□ 2.52
PCNX3-204ENST00000531045 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
PCNX3-204ENST00000531045 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
PCNX3-204ENST00000531045 DNMBPQ6XZF7 1577 aa30.4■■■□□ 2.46
PCNX3-204ENST00000531045 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
PCNX3-204ENST00000531045 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
PCNX3-204ENST00000531045 ZNF608Q9ULD9 1512 aaPredicted RBP30.37■■■□□ 2.45
PCNX3-204ENST00000531045 SUPT5HO00267 1087 aaKnown RBP30.35■■■□□ 2.45
PCNX3-204ENST00000531045 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
PCNX3-204ENST00000531045 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
PCNX3-204ENST00000531045 CUX1P39880 1505 aa30.16■■■□□ 2.42
PCNX3-204ENST00000531045 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
PCNX3-204ENST00000531045 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
PCNX3-204ENST00000531045 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
PCNX3-204ENST00000531045 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.412e-9■■■■□ 22.2
PCNX3-204ENST00000531045 FGD5Q6ZNL6 1462 aa30.07■■■□□ 2.4
PCNX3-204ENST00000531045 SOGA1O94964 1423 aa30.06■■■□□ 2.4
PCNX3-204ENST00000531045 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
PCNX3-204ENST00000531045 WDR97A6NE52 1622 aa29.86■■■□□ 2.37
PCNX3-204ENST00000531045 CHD1O14646 1710 aa29.8■■■□□ 2.36
PCNX3-204ENST00000531045 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
PCNX3-204ENST00000531045 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
PCNX3-204ENST00000531045 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
PCNX3-204ENST00000531045 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
PCNX3-204ENST00000531045 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
PCNX3-204ENST00000531045 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
PCNX3-204ENST00000531045 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
PCNX3-204ENST00000531045 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
PCNX3-204ENST00000531045 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
PCNX3-204ENST00000531045 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
PCNX3-204ENST00000531045 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
PCNX3-204ENST00000531045 MAGI1Q96QZ7 1491 aaPredicted RBP29.7■■■□□ 2.35
PCNX3-204ENST00000531045 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.34
PCNX3-204ENST00000531045 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
PCNX3-204ENST00000531045 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
PCNX3-204ENST00000531045 FBLN2P98095 1184 aa29.68■■■□□ 2.34
PCNX3-204ENST00000531045 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
PCNX3-204ENST00000531045 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
PCNX3-204ENST00000531045 CLASP1Q7Z460 1538 aa29.59■■■□□ 2.33
PCNX3-204ENST00000531045 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
PCNX3-204ENST00000531045 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
PCNX3-204ENST00000531045 ADAMTS12P58397 1594 aa29.42■■■□□ 2.3
PCNX3-204ENST00000531045 CYB5RLQ6IPT4 315 aa29.41■■■□□ 2.3
PCNX3-204ENST00000531045 GRIN2AQ12879 1464 aa29.38■■■□□ 2.29
PCNX3-204ENST00000531045 ERICH3Q5RHP9 1530 aa29.37■■■□□ 2.29
PCNX3-204ENST00000531045 FHAD1B1AJZ9 1412 aa29.34■■■□□ 2.29
PCNX3-204ENST00000531045 NUP160Q12769 1436 aa29.33■■■□□ 2.29
PCNX3-204ENST00000531045 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
PCNX3-204ENST00000531045 ERCC6L2Q5T890 1561 aa29.19■■■□□ 2.26
PCNX3-204ENST00000531045 IGF1RP08069 1367 aa29.18■■■□□ 2.26
PCNX3-204ENST00000531045 SHROOM2Q13796 1616 aa29.13■■■□□ 2.25
PCNX3-204ENST00000531045 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
PCNX3-204ENST00000531045 RUSC2Q8N2Y8 1516 aa29■■■□□ 2.23
PCNX3-204ENST00000531045 JPH4Q96JJ6 628 aa28.97■■■□□ 2.23
PCNX3-204ENST00000531045 CUL7Q14999 1698 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms