RNA–Protein interactions for RNA: ENST00000596368.1

SAMD4B-206, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 5 BASIC

Gene SAMD4B, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-206ENST00000596368 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
SAMD4B-206ENST00000596368 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
SAMD4B-206ENST00000596368 ABCC9O60706 1549 aa24.5■■□□□ 1.51
SAMD4B-206ENST00000596368 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
SAMD4B-206ENST00000596368 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
SAMD4B-206ENST00000596368 NACADO15069 1562 aa23.2■■□□□ 1.3
SAMD4B-206ENST00000596368 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
SAMD4B-206ENST00000596368 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
SAMD4B-206ENST00000596368 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
SAMD4B-206ENST00000596368 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
SAMD4B-206ENST00000596368 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
SAMD4B-206ENST00000596368 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
SAMD4B-206ENST00000596368 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
SAMD4B-206ENST00000596368 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
SAMD4B-206ENST00000596368 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
SAMD4B-206ENST00000596368 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
SAMD4B-206ENST00000596368 EIF4G1Q04637 1599 aaKnown RBP22.11■■□□□ 1.13
SAMD4B-206ENST00000596368 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
SAMD4B-206ENST00000596368 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
SAMD4B-206ENST00000596368 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
SAMD4B-206ENST00000596368 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
SAMD4B-206ENST00000596368 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
SAMD4B-206ENST00000596368 SMARCA2P51531 1590 aa21.31■■□□□ 1
SAMD4B-206ENST00000596368 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
SAMD4B-206ENST00000596368 HMGXB3Q12766 1538 aa21.27■■□□□ 1
SAMD4B-206ENST00000596368 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
SAMD4B-206ENST00000596368 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
SAMD4B-206ENST00000596368 NESP48681 1621 aa21.15■□□□□ 0.98
SAMD4B-206ENST00000596368 WIZO95785 1651 aa21.08■□□□□ 0.96
SAMD4B-206ENST00000596368 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
SAMD4B-206ENST00000596368 CUX2O14529 1486 aa20.92■□□□□ 0.94
SAMD4B-206ENST00000596368 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
SAMD4B-206ENST00000596368 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
SAMD4B-206ENST00000596368 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
SAMD4B-206ENST00000596368 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
SAMD4B-206ENST00000596368 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
SAMD4B-206ENST00000596368 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
SAMD4B-206ENST00000596368 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
SAMD4B-206ENST00000596368 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
SAMD4B-206ENST00000596368 CFTRP13569 1480 aa20.62■□□□□ 0.89
SAMD4B-206ENST00000596368 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
SAMD4B-206ENST00000596368 FANCD2Q9BXW9 1451 aa20.57■□□□□ 0.88
SAMD4B-206ENST00000596368 WDR62O43379 1518 aa20.56■□□□□ 0.88
SAMD4B-206ENST00000596368 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
SAMD4B-206ENST00000596368 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
SAMD4B-206ENST00000596368 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
SAMD4B-206ENST00000596368 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
SAMD4B-206ENST00000596368 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
SAMD4B-206ENST00000596368 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
SAMD4B-206ENST00000596368 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
SAMD4B-206ENST00000596368 DNMBPQ6XZF7 1577 aa20.13■□□□□ 0.81
SAMD4B-206ENST00000596368 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
SAMD4B-206ENST00000596368 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
SAMD4B-206ENST00000596368 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
SAMD4B-206ENST00000596368 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
SAMD4B-206ENST00000596368 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
SAMD4B-206ENST00000596368 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.8
SAMD4B-206ENST00000596368 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.796e-7■■■■□ 25.9
SAMD4B-206ENST00000596368 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
SAMD4B-206ENST00000596368 CUX1P39880 1505 aa19.98■□□□□ 0.79
SAMD4B-206ENST00000596368 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
SAMD4B-206ENST00000596368 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
SAMD4B-206ENST00000596368 SOGA1O94964 1423 aa19.93■□□□□ 0.78
SAMD4B-206ENST00000596368 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
SAMD4B-206ENST00000596368 CHD1O14646 1710 aa19.88■□□□□ 0.77
SAMD4B-206ENST00000596368 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
SAMD4B-206ENST00000596368 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
SAMD4B-206ENST00000596368 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
SAMD4B-206ENST00000596368 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
SAMD4B-206ENST00000596368 FBLN2P98095 1184 aa19.79■□□□□ 0.76
SAMD4B-206ENST00000596368 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
SAMD4B-206ENST00000596368 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
SAMD4B-206ENST00000596368 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
SAMD4B-206ENST00000596368 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
SAMD4B-206ENST00000596368 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
SAMD4B-206ENST00000596368 GAPVD1Q14C86 1478 aa19.69■□□□□ 0.74
SAMD4B-206ENST00000596368 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
SAMD4B-206ENST00000596368 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
SAMD4B-206ENST00000596368 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
SAMD4B-206ENST00000596368 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
SAMD4B-206ENST00000596368 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
SAMD4B-206ENST00000596368 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
SAMD4B-206ENST00000596368 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
SAMD4B-206ENST00000596368 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
SAMD4B-206ENST00000596368 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
SAMD4B-206ENST00000596368 SYNJ2O15056 1496 aa19.61■□□□□ 0.73
SAMD4B-206ENST00000596368 ARAP1Q96P48 1450 aa19.59■□□□□ 0.73
SAMD4B-206ENST00000596368 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
SAMD4B-206ENST00000596368 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
SAMD4B-206ENST00000596368 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
SAMD4B-206ENST00000596368 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
SAMD4B-206ENST00000596368 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
SAMD4B-206ENST00000596368 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
SAMD4B-206ENST00000596368 NUP160Q12769 1436 aa19.4■□□□□ 0.7
SAMD4B-206ENST00000596368 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
SAMD4B-206ENST00000596368 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
SAMD4B-206ENST00000596368 IGF1RP08069 1367 aa19.3■□□□□ 0.68
SAMD4B-206ENST00000596368 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
SAMD4B-206ENST00000596368 JPH4Q96JJ6 628 aa19.23■□□□□ 0.67
SAMD4B-206ENST00000596368 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms