RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 NISCHQ9Y2I1 1504 aa49.91■■■■■ 5.58
ARF4-202ENST00000463880 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
ARF4-202ENST00000463880 ABCC9O60706 1549 aa43.31■■■■■ 4.52
ARF4-202ENST00000463880 DCAF8L2P0C7V8 631 aa41.91■■■■■ 4.3
ARF4-202ENST00000463880 RB1CC1Q8TDY2 1594 aa41.6■■■■■ 4.25
ARF4-202ENST00000463880 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
ARF4-202ENST00000463880 NACADO15069 1562 aa41.57■■■■■ 4.25
ARF4-202ENST00000463880 MYO15BQ96JP2 1530 aa41.28■■■■■ 4.2
ARF4-202ENST00000463880 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
ARF4-202ENST00000463880 UNC13AQ9UPW8 1703 aa40.67■■■■■ 4.1
ARF4-202ENST00000463880 PABPN1Q86U42 306 aaKnown RBP eCLIP40.58■■■■■ 4.09
ARF4-202ENST00000463880 SCRIBQ14160 1630 aa40.53■■■■■ 4.08
ARF4-202ENST00000463880 BICRAQ9NZM4 1560 aa40.34■■■■■ 4.05
ARF4-202ENST00000463880 SHROOM4Q9ULL8 1493 aa39.8■■■■□ 3.96
ARF4-202ENST00000463880 DNAJC5BQ9UF47 199 aa39.62■■■■□ 3.93
ARF4-202ENST00000463880 EIF4G1Q04637 1599 aaKnown RBP39.29■■■■□ 3.88
ARF4-202ENST00000463880 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
ARF4-202ENST00000463880 CECR2Q9BXF3 1484 aa38.94■■■■□ 3.82
ARF4-202ENST00000463880 SMARCA4P51532 1647 aa38.7■■■■□ 3.79
ARF4-202ENST00000463880 BAZ1AQ9NRL2 1556 aaPredicted RBP38.66■■■■□ 3.78
ARF4-202ENST00000463880 MROH2BQ7Z745 1585 aa38.52■■■■□ 3.76
ARF4-202ENST00000463880 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
ARF4-202ENST00000463880 SMARCA2P51531 1590 aa38.38■■■■□ 3.73
ARF4-202ENST00000463880 NCAPD3P42695 1498 aa38.36■■■■□ 3.73
ARF4-202ENST00000463880 PEG3Q9GZU2 1588 aa38.23■■■■□ 3.71
ARF4-202ENST00000463880 BAZ1BQ9UIG0 1483 aaKnown RBP38.18■■■■□ 3.7
ARF4-202ENST00000463880 HMGXB3Q12766 1538 aa38.17■■■■□ 3.7
ARF4-202ENST00000463880 RSF1Q96T23 1441 aaPredicted RBP38.13■■■■□ 3.7
ARF4-202ENST00000463880 WIZO95785 1651 aa38.13■■■■□ 3.69
ARF4-202ENST00000463880 TOP2AP11388 1531 aaKnown RBP37.67■■■■□ 3.62
ARF4-202ENST00000463880 NESP48681 1621 aa37.51■■■■□ 3.6
ARF4-202ENST00000463880 SUPT5HO00267 1087 aaKnown RBP37.5■■■■□ 3.59
ARF4-202ENST00000463880 LAMC3Q9Y6N6 1575 aa37.32■■■■□ 3.56
ARF4-202ENST00000463880 CADPSQ9ULU8 1353 aa37.31■■■■□ 3.56
ARF4-202ENST00000463880 ERCC6Q03468 1493 aa37.3■■■■□ 3.56
ARF4-202ENST00000463880 CCDC88BA6NC98 1476 aa37.28■■■■□ 3.56
ARF4-202ENST00000463880 PDS5BQ9NTI5 1447 aa37.12■■■■□ 3.53
ARF4-202ENST00000463880 CFTRP13569 1480 aa37.09■■■■□ 3.53
ARF4-202ENST00000463880 KIF21AQ7Z4S6 1674 aa37.02■■■■□ 3.52
ARF4-202ENST00000463880 FANCD2Q9BXW9 1451 aa36.91■■■■□ 3.5
ARF4-202ENST00000463880 CEP164Q9UPV0 1460 aa36.83■■■■□ 3.49
ARF4-202ENST00000463880 THOC2Q8NI27 1593 aaKnown RBP36.81■■■■□ 3.48
ARF4-202ENST00000463880 PRDM2Q13029 1718 aa36.77■■■■□ 3.48
ARF4-202ENST00000463880 CUX2O14529 1486 aa36.73■■■■□ 3.47
ARF4-202ENST00000463880 MRC2Q9UBG0 1479 aa36.73■■■■□ 3.47
ARF4-202ENST00000463880 WDR62O43379 1518 aa36.55■■■■□ 3.44
ARF4-202ENST00000463880 URB2Q14146 1524 aaKnown RBP36.52■■■■□ 3.44
ARF4-202ENST00000463880 TOPBP1Q92547 1522 aa36.32■■■■□ 3.4
ARF4-202ENST00000463880 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
ARF4-202ENST00000463880 ABCC8Q09428 1581 aa36.26■■■■□ 3.39
ARF4-202ENST00000463880 CUX1P39880 1505 aa36.12■■■■□ 3.37
ARF4-202ENST00000463880 IFT140Q96RY7 1462 aa36.03■■■■□ 3.36
ARF4-202ENST00000463880 POLA1P09884 1462 aaPredicted RBP36.02■■■■□ 3.36
ARF4-202ENST00000463880 FGD5Q6ZNL6 1462 aa35.99■■■■□ 3.35
ARF4-202ENST00000463880 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.35
ARF4-202ENST00000463880 RAD54L2Q9Y4B4 1467 aa35.94■■■■□ 3.34
ARF4-202ENST00000463880 ZNF608Q9ULD9 1512 aaPredicted RBP35.92■■■■□ 3.34
ARF4-202ENST00000463880 SOGA1O94964 1423 aa35.91■■■■□ 3.34
ARF4-202ENST00000463880 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
ARF4-202ENST00000463880 SYNJ1O43426 1573 aa35.86■■■■□ 3.33
ARF4-202ENST00000463880 TOP2BQ02880 1626 aa35.81■■■■□ 3.32
ARF4-202ENST00000463880 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
ARF4-202ENST00000463880 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.32
ARF4-202ENST00000463880 TDRD9Q8NDG6 1382 aaKnown RBP35.74■■■■□ 3.31
ARF4-202ENST00000463880 EIF4G3O43432 1585 aaKnown RBP35.72■■■■□ 3.31
ARF4-202ENST00000463880 WDR97A6NE52 1622 aa35.59■■■■□ 3.29
ARF4-202ENST00000463880 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
ARF4-202ENST00000463880 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
ARF4-202ENST00000463880 DNAJC5Q9H3Z4 198 aa35.48■■■■□ 3.27
ARF4-202ENST00000463880 GRIN2BQ13224 1484 aa35.43■■■■□ 3.26
ARF4-202ENST00000463880 FBLN2P98095 1184 aa35.41■■■■□ 3.26
ARF4-202ENST00000463880 ABCA5Q8WWZ7 1642 aa35.41■■■■□ 3.26
ARF4-202ENST00000463880 SNAPC4Q5SXM2 1469 aa35.4■■■■□ 3.26
ARF4-202ENST00000463880 PBRM1Q86U86 1689 aa35.37■■■■□ 3.25
ARF4-202ENST00000463880 OSCARQ8IYS5 282 aa35.35■■■■□ 3.25
ARF4-202ENST00000463880 TRIM41Q8WV44 630 aa35.34■■■■□ 3.25
ARF4-202ENST00000463880 MAGI1Q96QZ7 1491 aaPredicted RBP35.29■■■■□ 3.24
ARF4-202ENST00000463880 CHD1O14646 1710 aa35.26■■■■□ 3.24
ARF4-202ENST00000463880 CHMP7Q8WUX9 453 aaPredicted RBP35.26■■■■□ 3.24
ARF4-202ENST00000463880 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
ARF4-202ENST00000463880 SYNJ2O15056 1496 aa35.17■■■■□ 3.22
ARF4-202ENST00000463880 ERICH3Q5RHP9 1530 aa35.15■■■■□ 3.22
ARF4-202ENST00000463880 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
ARF4-202ENST00000463880 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
ARF4-202ENST00000463880 IGF1RP08069 1367 aa35.04■■■■□ 3.2
ARF4-202ENST00000463880 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.19
ARF4-202ENST00000463880 CHIC1Q5VXU3 224 aa35■■■■□ 3.19
ARF4-202ENST00000463880 GRIN2AQ12879 1464 aa34.98■■■■□ 3.19
ARF4-202ENST00000463880 CUL7Q14999 1698 aa34.86■■■■□ 3.17
ARF4-202ENST00000463880 CARMIL1Q5VZK9 1371 aa34.86■■■■□ 3.17
ARF4-202ENST00000463880 CLASP1Q7Z460 1538 aa34.83■■■■□ 3.17
ARF4-202ENST00000463880 CEP170Q5SW79 1584 aa34.8■■■■□ 3.16
ARF4-202ENST00000463880 NUP160Q12769 1436 aa34.79■■■■□ 3.16
ARF4-202ENST00000463880 ARHGEF11O15085 1522 aa34.73■■■■□ 3.15
ARF4-202ENST00000463880 RIMBP3CA6NJZ7 1639 aa34.72■■■■□ 3.15
ARF4-202ENST00000463880 RIMBP3BA6NNM3 1639 aa34.72■■■■□ 3.15
ARF4-202ENST00000463880 RIMBP3Q9UFD9 1639 aa34.72■■■■□ 3.15
ARF4-202ENST00000463880 FAM9AQ8IZU1 332 aaPredicted RBP34.71■■■■□ 3.15
ARF4-202ENST00000463880 RAPGEF2Q9Y4G8 1499 aa34.64■■■■□ 3.14
ARF4-202ENST00000463880 CSRNP3Q8WYN3 585 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms