Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 YBX1P4-201ENST00000392794 808 ntBASIC19.71■□□□□ 0.75
ZNF48Q96MX3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF48Q96MX3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF48Q96MX3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF48Q96MX3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 AC009299.2-201ENST00000482477 511 ntBASIC19.69■□□□□ 0.74
ZNF48Q96MX3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF48Q96MX3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF48Q96MX3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 MIR4508-201ENST00000584178 70 ntBASIC19.67■□□□□ 0.74
ZNF48Q96MX3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF48Q96MX3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF48Q96MX3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF48Q96MX3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF48Q96MX3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ZNF48Q96MX3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.64■□□□□ 0.74
ZNF48Q96MX3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF48Q96MX3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF48Q96MX3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF48Q96MX3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF48Q96MX3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF48Q96MX3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF48Q96MX3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF48Q96MX3 AL449106.1-201ENST00000608517 1980 ntBASIC19.63■□□□□ 0.73
ZNF48Q96MX3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF48Q96MX3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF48Q96MX3 AC103724.3-201ENST00000564481 992 ntBASIC19.62■□□□□ 0.73
ZNF48Q96MX3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF48Q96MX3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF48Q96MX3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ZNF48Q96MX3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ZNF48Q96MX3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF48Q96MX3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF48Q96MX3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF48Q96MX3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF48Q96MX3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF48Q96MX3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF48Q96MX3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF48Q96MX3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF48Q96MX3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF48Q96MX3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF48Q96MX3 AC087393.1-201ENST00000582896 145 ntBASIC19.6■□□□□ 0.73
ZNF48Q96MX3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ZNF48Q96MX3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF48Q96MX3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF48Q96MX3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF48Q96MX3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF48Q96MX3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF48Q96MX3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF48Q96MX3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ZNF48Q96MX3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF48Q96MX3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF48Q96MX3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF48Q96MX3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms