Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNED1Q8TER0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SNED1Q8TER0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNED1Q8TER0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SNED1Q8TER0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNED1Q8TER0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SNED1Q8TER0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
SNED1Q8TER0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNED1Q8TER0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNED1Q8TER0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
SNED1Q8TER0 UNC93B8-201ENST00000511903 705 ntBASIC30.01■■■□□ 2.39
SNED1Q8TER0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SNED1Q8TER0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SNED1Q8TER0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SNED1Q8TER0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30■■■□□ 2.39
SNED1Q8TER0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SNED1Q8TER0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30■■■□□ 2.39
SNED1Q8TER0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30■■■□□ 2.39
SNED1Q8TER0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNED1Q8TER0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.99■■■□□ 2.39
SNED1Q8TER0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.99■■■□□ 2.39
SNED1Q8TER0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNED1Q8TER0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.98■■■□□ 2.39
SNED1Q8TER0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SNED1Q8TER0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
SNED1Q8TER0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.96■■■□□ 2.39
SNED1Q8TER0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.96■■■□□ 2.39
SNED1Q8TER0 MIR935-201ENST00000401179 91 ntBASIC29.96■■■□□ 2.39
SNED1Q8TER0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SNED1Q8TER0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SNED1Q8TER0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SNED1Q8TER0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.95■■■□□ 2.39
SNED1Q8TER0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SNED1Q8TER0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.95■■■□□ 2.38
SNED1Q8TER0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.95■■■□□ 2.38
SNED1Q8TER0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.95■■■□□ 2.38
SNED1Q8TER0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNED1Q8TER0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
SNED1Q8TER0 MIR4787-201ENST00000607364 84 ntBASIC29.94■■■□□ 2.38
SNED1Q8TER0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.94■■■□□ 2.38
SNED1Q8TER0 AC008406.3-201ENST00000620001 1374 ntBASIC29.93■■■□□ 2.38
SNED1Q8TER0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNED1Q8TER0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
SNED1Q8TER0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
SNED1Q8TER0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.93■■■□□ 2.38
SNED1Q8TER0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.92■■■□□ 2.38
SNED1Q8TER0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.92■■■□□ 2.38
SNED1Q8TER0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNED1Q8TER0 MIR638-201ENST00000385237 100 ntBASIC29.91■■■□□ 2.38
SNED1Q8TER0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNED1Q8TER0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.91■■■□□ 2.38
SNED1Q8TER0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
SNED1Q8TER0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNED1Q8TER0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.91■■■□□ 2.38
SNED1Q8TER0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SNED1Q8TER0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SNED1Q8TER0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
SNED1Q8TER0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
SNED1Q8TER0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SNED1Q8TER0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SNED1Q8TER0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
SNED1Q8TER0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.89■■■□□ 2.38
SNED1Q8TER0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
SNED1Q8TER0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
SNED1Q8TER0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SNED1Q8TER0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNED1Q8TER0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC29.88■■■□□ 2.37
SNED1Q8TER0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNED1Q8TER0 BX664725.1-201ENST00000438252 379 ntBASIC29.88■■■□□ 2.37
SNED1Q8TER0 AC022616.5-201ENST00000518796 181 ntBASIC29.88■■■□□ 2.37
SNED1Q8TER0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.87■■■□□ 2.37
SNED1Q8TER0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.87■■■□□ 2.37
SNED1Q8TER0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
SNED1Q8TER0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
SNED1Q8TER0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SNED1Q8TER0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNED1Q8TER0 KRT16P3-201ENST00000439127 1283 ntBASIC29.85■■■□□ 2.37
SNED1Q8TER0 KRT125P-201ENST00000546827 989 ntBASIC29.85■■■□□ 2.37
SNED1Q8TER0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.85■■■□□ 2.37
SNED1Q8TER0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
SNED1Q8TER0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
SNED1Q8TER0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
SNED1Q8TER0 KRT18P24-201ENST00000344739 1156 ntBASIC29.84■■■□□ 2.37
SNED1Q8TER0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SNED1Q8TER0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
SNED1Q8TER0 AC137630.3-201ENST00000607245 391 ntBASIC29.84■■■□□ 2.37
SNED1Q8TER0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC29.84■■■□□ 2.37
SNED1Q8TER0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SNED1Q8TER0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.83■■■□□ 2.37
SNED1Q8TER0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.83■■■□□ 2.37
SNED1Q8TER0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.83■■■□□ 2.37
SNED1Q8TER0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SNED1Q8TER0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNED1Q8TER0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNED1Q8TER0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
SNED1Q8TER0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNED1Q8TER0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SNED1Q8TER0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.82■■■□□ 2.36
SNED1Q8TER0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.82■■■□□ 2.36
SNED1Q8TER0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms