Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCNKAP51800 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.79■■□□□ 1.4
CLCNKAP51800 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCNKAP51800 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.78■■□□□ 1.4
CLCNKAP51800 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCNKAP51800 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCNKAP51800 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.77■■□□□ 1.4
CLCNKAP51800 AC018755.3-202ENST00000596210 929 ntBASIC23.77■■□□□ 1.4
CLCNKAP51800 MIR6765-201ENST00000614092 87 ntBASIC23.77■■□□□ 1.4
CLCNKAP51800 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCNKAP51800 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CLCNKAP51800 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLCNKAP51800 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCNKAP51800 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCNKAP51800 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.75■■□□□ 1.39
CLCNKAP51800 DUX4L18-201ENST00000553347 1267 ntBASIC23.75■■□□□ 1.39
CLCNKAP51800 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCNKAP51800 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCNKAP51800 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.74■■□□□ 1.39
CLCNKAP51800 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCNKAP51800 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CLCNKAP51800 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCNKAP51800 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CLCNKAP51800 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCNKAP51800 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.73■■□□□ 1.39
CLCNKAP51800 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCNKAP51800 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCNKAP51800 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCNKAP51800 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
CLCNKAP51800 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCNKAP51800 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCNKAP51800 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCNKAP51800 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.72■■□□□ 1.39
CLCNKAP51800 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCNKAP51800 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.72■■□□□ 1.39
CLCNKAP51800 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCNKAP51800 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.72■■□□□ 1.39
CLCNKAP51800 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.72■■□□□ 1.39
CLCNKAP51800 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.72■■□□□ 1.39
CLCNKAP51800 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CLCNKAP51800 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCNKAP51800 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCNKAP51800 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCNKAP51800 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLCNKAP51800 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLCNKAP51800 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.71■■□□□ 1.39
CLCNKAP51800 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.71■■□□□ 1.39
CLCNKAP51800 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCNKAP51800 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLCNKAP51800 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCNKAP51800 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCNKAP51800 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.7■■□□□ 1.38
CLCNKAP51800 AC074183.2-201ENST00000623112 922 ntBASIC23.7■■□□□ 1.38
CLCNKAP51800 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CLCNKAP51800 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CLCNKAP51800 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.7■■□□□ 1.38
CLCNKAP51800 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCNKAP51800 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCNKAP51800 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLCNKAP51800 KRT18P10-201ENST00000388836 1287 ntBASIC23.68■■□□□ 1.38
CLCNKAP51800 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.68■■□□□ 1.38
CLCNKAP51800 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLCNKAP51800 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLCNKAP51800 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCNKAP51800 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
CLCNKAP51800 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.67■■□□□ 1.38
CLCNKAP51800 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCNKAP51800 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CLCNKAP51800 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLCNKAP51800 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLCNKAP51800 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.66■■□□□ 1.38
CLCNKAP51800 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
CLCNKAP51800 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CLCNKAP51800 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLCNKAP51800 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CLCNKAP51800 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLCNKAP51800 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.65■■□□□ 1.38
CLCNKAP51800 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLCNKAP51800 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLCNKAP51800 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.65■■□□□ 1.38
CLCNKAP51800 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLCNKAP51800 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLCNKAP51800 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLCNKAP51800 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.64■■□□□ 1.37
CLCNKAP51800 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLCNKAP51800 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.64■■□□□ 1.37
CLCNKAP51800 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCNKAP51800 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms