Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
A0A1W2PRF3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
A0A1W2PRF3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
A0A1W2PRF3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.81■□□□□ 0.76
A0A1W2PRF3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
A0A1W2PRF3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
A0A1W2PRF3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.81■□□□□ 0.76
A0A1W2PRF3 DUX4L9-201ENST00000449051 1259 ntBASIC19.81■□□□□ 0.76
A0A1W2PRF3 SPCS2P3-201ENST00000500401 656 ntBASIC19.81■□□□□ 0.76
A0A1W2PRF3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
A0A1W2PRF3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
A0A1W2PRF3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
A0A1W2PRF3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
A0A1W2PRF3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
A0A1W2PRF3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
A0A1W2PRF3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.79■□□□□ 0.76
A0A1W2PRF3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
A0A1W2PRF3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.79■□□□□ 0.76
A0A1W2PRF3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
A0A1W2PRF3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
A0A1W2PRF3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
A0A1W2PRF3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
A0A1W2PRF3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
A0A1W2PRF3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
A0A1W2PRF3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
A0A1W2PRF3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.78■□□□□ 0.76
A0A1W2PRF3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
A0A1W2PRF3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
A0A1W2PRF3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
A0A1W2PRF3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
A0A1W2PRF3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.77■□□□□ 0.76
A0A1W2PRF3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
A0A1W2PRF3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
A0A1W2PRF3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
A0A1W2PRF3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
A0A1W2PRF3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
A0A1W2PRF3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
A0A1W2PRF3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
A0A1W2PRF3 AC018755.3-202ENST00000596210 929 ntBASIC19.76■□□□□ 0.75
A0A1W2PRF3 BHLHE23-202ENST00000612929 1109 ntBASIC19.76■□□□□ 0.75
A0A1W2PRF3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
A0A1W2PRF3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
A0A1W2PRF3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.75■□□□□ 0.75
A0A1W2PRF3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
A0A1W2PRF3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
A0A1W2PRF3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 AL121749.1-202ENST00000609313 2153 ntBASIC19.75■□□□□ 0.75
A0A1W2PRF3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
A0A1W2PRF3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
A0A1W2PRF3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
A0A1W2PRF3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.74■□□□□ 0.75
A0A1W2PRF3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
A0A1W2PRF3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
A0A1W2PRF3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
A0A1W2PRF3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.74■□□□□ 0.75
A0A1W2PRF3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.74■□□□□ 0.75
A0A1W2PRF3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
A0A1W2PRF3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
A0A1W2PRF3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
A0A1W2PRF3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
A0A1W2PRF3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
A0A1W2PRF3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.73■□□□□ 0.75
A0A1W2PRF3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
A0A1W2PRF3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.73■□□□□ 0.75
A0A1W2PRF3 MIR6765-201ENST00000614092 87 ntBASIC19.73■□□□□ 0.75
A0A1W2PRF3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
A0A1W2PRF3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
A0A1W2PRF3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
A0A1W2PRF3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
A0A1W2PRF3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
A0A1W2PRF3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
A0A1W2PRF3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
A0A1W2PRF3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
A0A1W2PRF3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.71■□□□□ 0.75
A0A1W2PRF3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
A0A1W2PRF3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
A0A1W2PRF3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
A0A1W2PRF3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
A0A1W2PRF3 AC139795.1-202ENST00000500444 432 ntBASIC19.7■□□□□ 0.74
A0A1W2PRF3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.7■□□□□ 0.74
A0A1W2PRF3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.7■□□□□ 0.74
A0A1W2PRF3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms