Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGHV4-28A0A0C4DH34 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGHV4-28A0A0C4DH34 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGHV4-28A0A0C4DH34 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IGHV4-28A0A0C4DH34 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.47■□□□□ 0.39
IGHV4-28A0A0C4DH34 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGHV4-28A0A0C4DH34 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.46■□□□□ 0.39
IGHV4-28A0A0C4DH34 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGHV4-28A0A0C4DH34 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGHV4-28A0A0C4DH34 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGHV4-28A0A0C4DH34 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
IGHV4-28A0A0C4DH34 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
IGHV4-28A0A0C4DH34 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGHV4-28A0A0C4DH34 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 BHLHE23-202ENST00000612929 1109 ntBASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGHV4-28A0A0C4DH34 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGHV4-28A0A0C4DH34 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 AC139795.1-202ENST00000500444 432 ntBASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGHV4-28A0A0C4DH34 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
IGHV4-28A0A0C4DH34 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.41■□□□□ 0.38
IGHV4-28A0A0C4DH34 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.41■□□□□ 0.38
IGHV4-28A0A0C4DH34 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV4-28A0A0C4DH34 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGHV4-28A0A0C4DH34 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
IGHV4-28A0A0C4DH34 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGHV4-28A0A0C4DH34 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IGHV4-28A0A0C4DH34 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
IGHV4-28A0A0C4DH34 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.39■□□□□ 0.37
IGHV4-28A0A0C4DH34 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGHV4-28A0A0C4DH34 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGHV4-28A0A0C4DH34 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
IGHV4-28A0A0C4DH34 AC010980.1-201ENST00000587192 1142 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms