Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
IGHV4-28A0A0C4DH34 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
IGHV4-28A0A0C4DH34 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
IGHV4-28A0A0C4DH34 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
IGHV4-28A0A0C4DH34 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
IGHV4-28A0A0C4DH34 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC23.95■■□□□ 1.42
IGHV4-28A0A0C4DH34 AL356512.1-201ENST00000607453 1739 ntBASIC23.94■■□□□ 1.42
IGHV4-28A0A0C4DH34 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
IGHV4-28A0A0C4DH34 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.42■■□□□ 1.34
IGHV4-28A0A0C4DH34 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
IGHV4-28A0A0C4DH34 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
IGHV4-28A0A0C4DH34 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.22■■□□□ 1.31
IGHV4-28A0A0C4DH34 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
IGHV4-28A0A0C4DH34 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23.08■■□□□ 1.28
IGHV4-28A0A0C4DH34 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
IGHV4-28A0A0C4DH34 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC23.02■■□□□ 1.28
IGHV4-28A0A0C4DH34 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC22.94■■□□□ 1.26
IGHV4-28A0A0C4DH34 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.9■■□□□ 1.26
IGHV4-28A0A0C4DH34 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
IGHV4-28A0A0C4DH34 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
IGHV4-28A0A0C4DH34 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.85■■□□□ 1.25
IGHV4-28A0A0C4DH34 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
IGHV4-28A0A0C4DH34 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
IGHV4-28A0A0C4DH34 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
IGHV4-28A0A0C4DH34 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IGHV4-28A0A0C4DH34 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IGHV4-28A0A0C4DH34 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
IGHV4-28A0A0C4DH34 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
IGHV4-28A0A0C4DH34 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
IGHV4-28A0A0C4DH34 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IGHV4-28A0A0C4DH34 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IGHV4-28A0A0C4DH34 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC22.22■■□□□ 1.15
IGHV4-28A0A0C4DH34 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
IGHV4-28A0A0C4DH34 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
IGHV4-28A0A0C4DH34 INO80B-203ENST00000409917 796 ntTSL 2 BASIC22.11■■□□□ 1.13
IGHV4-28A0A0C4DH34 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC22.08■■□□□ 1.13
IGHV4-28A0A0C4DH34 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
IGHV4-28A0A0C4DH34 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
IGHV4-28A0A0C4DH34 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.96■■□□□ 1.11
IGHV4-28A0A0C4DH34 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IGHV4-28A0A0C4DH34 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGHV4-28A0A0C4DH34 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IGHV4-28A0A0C4DH34 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
IGHV4-28A0A0C4DH34 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
IGHV4-28A0A0C4DH34 AC015813.7-201ENST00000623294 581 ntBASIC21.81■■□□□ 1.08
IGHV4-28A0A0C4DH34 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
IGHV4-28A0A0C4DH34 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
IGHV4-28A0A0C4DH34 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.74■■□□□ 1.07
IGHV4-28A0A0C4DH34 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.74■■□□□ 1.07
IGHV4-28A0A0C4DH34 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IGHV4-28A0A0C4DH34 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.73■■□□□ 1.07
IGHV4-28A0A0C4DH34 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
IGHV4-28A0A0C4DH34 AC006077.2-201ENST00000623591 457 ntBASIC21.61■■□□□ 1.05
IGHV4-28A0A0C4DH34 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
IGHV4-28A0A0C4DH34 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.58■■□□□ 1.05
IGHV4-28A0A0C4DH34 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IGHV4-28A0A0C4DH34 ZNRF2P1-201ENST00000441407 443 ntBASIC21.54■■□□□ 1.04
IGHV4-28A0A0C4DH34 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.5■■□□□ 1.03
IGHV4-28A0A0C4DH34 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IGHV4-28A0A0C4DH34 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IGHV4-28A0A0C4DH34 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
IGHV4-28A0A0C4DH34 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IGHV4-28A0A0C4DH34 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IGHV4-28A0A0C4DH34 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IGHV4-28A0A0C4DH34 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IGHV4-28A0A0C4DH34 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IGHV4-28A0A0C4DH34 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
IGHV4-28A0A0C4DH34 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IGHV4-28A0A0C4DH34 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
IGHV4-28A0A0C4DH34 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.26■□□□□ 0.99
IGHV4-28A0A0C4DH34 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
IGHV4-28A0A0C4DH34 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IGHV4-28A0A0C4DH34 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
IGHV4-28A0A0C4DH34 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.13■□□□□ 0.97
IGHV4-28A0A0C4DH34 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IGHV4-28A0A0C4DH34 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGHV4-28A0A0C4DH34 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
IGHV4-28A0A0C4DH34 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV4-28A0A0C4DH34 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.05■□□□□ 0.96
IGHV4-28A0A0C4DH34 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV4-28A0A0C4DH34 AP002365.1-201ENST00000603448 772 ntBASIC21.04■□□□□ 0.96
IGHV4-28A0A0C4DH34 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
IGHV4-28A0A0C4DH34 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.01■□□□□ 0.95
IGHV4-28A0A0C4DH34 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGHV4-28A0A0C4DH34 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGHV4-28A0A0C4DH34 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21■□□□□ 0.95
IGHV4-28A0A0C4DH34 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGHV4-28A0A0C4DH34 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV4-28A0A0C4DH34 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV4-28A0A0C4DH34 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV4-28A0A0C4DH34 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGHV4-28A0A0C4DH34 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
IGHV4-28A0A0C4DH34 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.93■□□□□ 0.94
IGHV4-28A0A0C4DH34 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGHV4-28A0A0C4DH34 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV4-28A0A0C4DH34 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
IGHV4-28A0A0C4DH34 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
IGHV4-28A0A0C4DH34 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IGHV4-28A0A0C4DH34 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
IGHV4-28A0A0C4DH34 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms