Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV4A0A0C4DH28 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRGV4A0A0C4DH28 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 AC060814.1-201ENST00000554326 538 ntBASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV4A0A0C4DH28 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 MIR4449-201ENST00000578365 66 ntBASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV4A0A0C4DH28 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV4A0A0C4DH28 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV4A0A0C4DH28 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRGV4A0A0C4DH28 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV4A0A0C4DH28 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 DUSP8P4-201ENST00000399538 1761 ntBASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 SMPD5-203ENST00000639008 1464 ntBASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRGV4A0A0C4DH28 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms