Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 ZNF444P1-201ENST00000559497 298 ntBASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 PAUPAR-201ENST00000630360 2965 ntBASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
R3HCC1Q9Y3T6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 AL391807.1-203ENST00000604392 2365 ntBASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 AL121956.5-201ENST00000625261 221 ntBASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HCC1Q9Y3T6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 HBZP1-201ENST00000354915 429 ntBASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 AL031133.1-201ENST00000406807 723 ntBASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 AC092597.1-201ENST00000487352 616 ntBASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 VENTXP5-201ENST00000523979 775 ntBASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HCC1Q9Y3T6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms