RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
SCNN1A-205ENST00000396966 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
SCNN1A-205ENST00000396966 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
SCNN1A-205ENST00000396966 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.66
SCNN1A-205ENST00000396966 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
SCNN1A-205ENST00000396966 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
SCNN1A-205ENST00000396966 ABCC9O60706 1549 aa31.37■■■□□ 2.61
SCNN1A-205ENST00000396966 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
SCNN1A-205ENST00000396966 NACADO15069 1562 aa31.04■■■□□ 2.56
SCNN1A-205ENST00000396966 RB1CC1Q8TDY2 1594 aa30.76■■■□□ 2.51
SCNN1A-205ENST00000396966 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
SCNN1A-205ENST00000396966 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
SCNN1A-205ENST00000396966 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
SCNN1A-205ENST00000396966 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
SCNN1A-205ENST00000396966 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
SCNN1A-205ENST00000396966 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
SCNN1A-205ENST00000396966 MROH2BQ7Z745 1585 aa29.61■■■□□ 2.33
SCNN1A-205ENST00000396966 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
SCNN1A-205ENST00000396966 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
SCNN1A-205ENST00000396966 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
SCNN1A-205ENST00000396966 WIZO95785 1651 aa29.44■■■□□ 2.3
SCNN1A-205ENST00000396966 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
SCNN1A-205ENST00000396966 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
SCNN1A-205ENST00000396966 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
SCNN1A-205ENST00000396966 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
SCNN1A-205ENST00000396966 ATAD2BQ9ULI0 1458 aa28.88■■■□□ 2.21
SCNN1A-205ENST00000396966 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
SCNN1A-205ENST00000396966 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
SCNN1A-205ENST00000396966 BAZ1BQ9UIG0 1483 aaKnown RBP28.76■■■□□ 2.2
SCNN1A-205ENST00000396966 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
SCNN1A-205ENST00000396966 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
SCNN1A-205ENST00000396966 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
SCNN1A-205ENST00000396966 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
SCNN1A-205ENST00000396966 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
SCNN1A-205ENST00000396966 WRNQ14191 1432 aaPredicted RBP eCLIP28.05■■■□□ 2.08
SCNN1A-205ENST00000396966 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
SCNN1A-205ENST00000396966 CFTRP13569 1480 aa28.02■■■□□ 2.08
SCNN1A-205ENST00000396966 LOC105371045A0A1W2PR82 267 aa27.97■■■□□ 2.07
SCNN1A-205ENST00000396966 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
SCNN1A-205ENST00000396966 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
SCNN1A-205ENST00000396966 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
SCNN1A-205ENST00000396966 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
SCNN1A-205ENST00000396966 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.04
SCNN1A-205ENST00000396966 EEA1Q15075 1411 aa27.76■■■□□ 2.03
SCNN1A-205ENST00000396966 SOGA1O94964 1423 aa27.73■■■□□ 2.03
SCNN1A-205ENST00000396966 CUX1P39880 1505 aa27.68■■■□□ 2.02
SCNN1A-205ENST00000396966 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
SCNN1A-205ENST00000396966 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
SCNN1A-205ENST00000396966 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
SCNN1A-205ENST00000396966 NESP48681 1621 aa27.59■■■□□ 2.01
SCNN1A-205ENST00000396966 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
SCNN1A-205ENST00000396966 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
SCNN1A-205ENST00000396966 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
SCNN1A-205ENST00000396966 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
SCNN1A-205ENST00000396966 KIF21BO75037 1637 aa27.42■■□□□ 1.98
SCNN1A-205ENST00000396966 PDS5BQ9NTI5 1447 aa27.41■■□□□ 1.98
SCNN1A-205ENST00000396966 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
SCNN1A-205ENST00000396966 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
SCNN1A-205ENST00000396966 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
SCNN1A-205ENST00000396966 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
SCNN1A-205ENST00000396966 KIF21AQ7Z4S6 1674 aa27.35■■□□□ 1.97
SCNN1A-205ENST00000396966 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
SCNN1A-205ENST00000396966 TOPBP1Q92547 1522 aa27.33■■□□□ 1.96
SCNN1A-205ENST00000396966 TNIKQ9UKE5 1360 aa27.31■■□□□ 1.96
SCNN1A-205ENST00000396966 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
SCNN1A-205ENST00000396966 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
SCNN1A-205ENST00000396966 HRCP23327 699 aa27.23■■□□□ 1.95
SCNN1A-205ENST00000396966 CUX2O14529 1486 aa27.22■■□□□ 1.95
SCNN1A-205ENST00000396966 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.94
SCNN1A-205ENST00000396966 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
SCNN1A-205ENST00000396966 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
SCNN1A-205ENST00000396966 RAPGEF2Q9Y4G8 1499 aa27.18■■□□□ 1.94
SCNN1A-205ENST00000396966 PRXQ9BXM0 1461 aa27.16■■□□□ 1.94
SCNN1A-205ENST00000396966 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
SCNN1A-205ENST00000396966 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
SCNN1A-205ENST00000396966 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
SCNN1A-205ENST00000396966 MRC2Q9UBG0 1479 aa27.05■■□□□ 1.92
SCNN1A-205ENST00000396966 IGF1RP08069 1367 aa27.03■■□□□ 1.92
SCNN1A-205ENST00000396966 CLIP1P30622 1438 aa26.94■■□□□ 1.9
SCNN1A-205ENST00000396966 TRIM26Q12899 539 aaPredicted RBP26.93■■□□□ 1.9
SCNN1A-205ENST00000396966 CARMIL1Q5VZK9 1371 aa26.93■■□□□ 1.9
SCNN1A-205ENST00000396966 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
SCNN1A-205ENST00000396966 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
SCNN1A-205ENST00000396966 ABCA5Q8WWZ7 1642 aa26.91■■□□□ 1.9
SCNN1A-205ENST00000396966 CUL7Q14999 1698 aa26.91■■□□□ 1.9
SCNN1A-205ENST00000396966 WDR62O43379 1518 aa26.9■■□□□ 1.9
SCNN1A-205ENST00000396966 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.89
SCNN1A-205ENST00000396966 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
SCNN1A-205ENST00000396966 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
SCNN1A-205ENST00000396966 RANGAP1P46060 587 aaPredicted RBP26.76■■□□□ 1.87
SCNN1A-205ENST00000396966 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
SCNN1A-205ENST00000396966 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
SCNN1A-205ENST00000396966 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
SCNN1A-205ENST00000396966 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
SCNN1A-205ENST00000396966 CTTNBP2Q8WZ74 1663 aa26.69■■□□□ 1.86
SCNN1A-205ENST00000396966 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
SCNN1A-205ENST00000396966 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.85
SCNN1A-205ENST00000396966 ARHGAP35Q9NRY4 1499 aa26.6■■□□□ 1.85
SCNN1A-205ENST00000396966 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
SCNN1A-205ENST00000396966 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms