RNA–Protein interactions for RNA: ENST00000504689.1

PLXND1-205, Transcript of plexin D1, humanhuman

TSL 3 BASIC

Gene PLXND1, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-205ENST00000504689 NISCHQ9Y2I1 1504 aa43.55■■■■■ 4.56
PLXND1-205ENST00000504689 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
PLXND1-205ENST00000504689 ABCC9O60706 1549 aa37.05■■■■□ 3.52
PLXND1-205ENST00000504689 ZCCHC6Q5VYS8 1495 aaKnown RBP36.39■■■■□ 3.42
PLXND1-205ENST00000504689 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
PLXND1-205ENST00000504689 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
PLXND1-205ENST00000504689 MYO15BQ96JP2 1530 aa36.03■■■■□ 3.36
PLXND1-205ENST00000504689 NACADO15069 1562 aa36.03■■■■□ 3.36
PLXND1-205ENST00000504689 RB1CC1Q8TDY2 1594 aa35.92■■■■□ 3.34
PLXND1-205ENST00000504689 SCRIBQ14160 1630 aa35.1■■■■□ 3.21
PLXND1-205ENST00000504689 UNC13AQ9UPW8 1703 aa35.05■■■■□ 3.2
PLXND1-205ENST00000504689 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
PLXND1-205ENST00000504689 PABPN1Q86U42 306 aaKnown RBP eCLIP34.74■■■■□ 3.15
PLXND1-205ENST00000504689 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
PLXND1-205ENST00000504689 CECR2Q9BXF3 1484 aa33.84■■■■□ 3.01
PLXND1-205ENST00000504689 EIF4G1Q04637 1599 aaKnown RBP33.84■■■■□ 3.01
PLXND1-205ENST00000504689 BAZ1AQ9NRL2 1556 aaPredicted RBP33.71■■■□□ 2.99
PLXND1-205ENST00000504689 SMARCA4P51532 1647 aa33.65■■■□□ 2.98
PLXND1-205ENST00000504689 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
PLXND1-205ENST00000504689 CC2D2AQ9P2K1 1620 aa33.54■■■□□ 2.96
PLXND1-205ENST00000504689 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
PLXND1-205ENST00000504689 RSF1Q96T23 1441 aaPredicted RBP33.4■■■□□ 2.94
PLXND1-205ENST00000504689 ATAD2BQ9ULI0 1458 aa33.35■■■□□ 2.93
PLXND1-205ENST00000504689 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
PLXND1-205ENST00000504689 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
PLXND1-205ENST00000504689 NCAPD3P42695 1498 aa33.25■■■□□ 2.91
PLXND1-205ENST00000504689 WIZO95785 1651 aa33.2■■■□□ 2.91
PLXND1-205ENST00000504689 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
PLXND1-205ENST00000504689 BAZ1BQ9UIG0 1483 aaKnown RBP33.1■■■□□ 2.89
PLXND1-205ENST00000504689 SUPT5HO00267 1087 aaKnown RBP32.97■■■□□ 2.87
PLXND1-205ENST00000504689 TOP2AP11388 1531 aaKnown RBP32.92■■■□□ 2.86
PLXND1-205ENST00000504689 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
PLXND1-205ENST00000504689 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
PLXND1-205ENST00000504689 LAMC3Q9Y6N6 1575 aa32.26■■■□□ 2.75
PLXND1-205ENST00000504689 CFTRP13569 1480 aa32.24■■■□□ 2.75
PLXND1-205ENST00000504689 NESP48681 1621 aa32.23■■■□□ 2.75
PLXND1-205ENST00000504689 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
PLXND1-205ENST00000504689 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
PLXND1-205ENST00000504689 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
PLXND1-205ENST00000504689 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
PLXND1-205ENST00000504689 KIF21AQ7Z4S6 1674 aa31.85■■■□□ 2.69
PLXND1-205ENST00000504689 CEP164Q9UPV0 1460 aa31.83■■■□□ 2.69
PLXND1-205ENST00000504689 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
PLXND1-205ENST00000504689 THOC2Q8NI27 1593 aaKnown RBP31.62■■■□□ 2.65
PLXND1-205ENST00000504689 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
PLXND1-205ENST00000504689 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
PLXND1-205ENST00000504689 WDR62O43379 1518 aa31.54■■■□□ 2.64
PLXND1-205ENST00000504689 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
PLXND1-205ENST00000504689 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
PLXND1-205ENST00000504689 WRNQ14191 1432 aaPredicted RBP eCLIP31.47■■■□□ 2.63
PLXND1-205ENST00000504689 CUX1P39880 1505 aa31.45■■■□□ 2.63
PLXND1-205ENST00000504689 CUX2O14529 1486 aa31.38■■■□□ 2.61
PLXND1-205ENST00000504689 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
PLXND1-205ENST00000504689 TOP2BQ02880 1626 aa31.34■■■□□ 2.61
PLXND1-205ENST00000504689 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
PLXND1-205ENST00000504689 POLA1P09884 1462 aaPredicted RBP31.25■■■□□ 2.59
PLXND1-205ENST00000504689 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
PLXND1-205ENST00000504689 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
PLXND1-205ENST00000504689 SOGA1O94964 1423 aa31.15■■■□□ 2.58
PLXND1-205ENST00000504689 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
PLXND1-205ENST00000504689 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
PLXND1-205ENST00000504689 RAD54L2Q9Y4B4 1467 aa31.1■■■□□ 2.57
PLXND1-205ENST00000504689 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
PLXND1-205ENST00000504689 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
PLXND1-205ENST00000504689 WDR97A6NE52 1622 aa30.95■■■□□ 2.54
PLXND1-205ENST00000504689 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
PLXND1-205ENST00000504689 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
PLXND1-205ENST00000504689 AQRO60306 1485 aaKnown RBP eCLIP30.84■■■□□ 2.539e-10■■■■□ 21
PLXND1-205ENST00000504689 EIF4G3O43432 1585 aaKnown RBP30.83■■■□□ 2.53
PLXND1-205ENST00000504689 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
PLXND1-205ENST00000504689 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
PLXND1-205ENST00000504689 KIF27Q86VH2 1401 aa30.79■■■□□ 2.52
PLXND1-205ENST00000504689 GRIN2BQ13224 1484 aa30.71■■■□□ 2.51
PLXND1-205ENST00000504689 RUSC2Q8N2Y8 1516 aa30.64■■■□□ 2.5
PLXND1-205ENST00000504689 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
PLXND1-205ENST00000504689 ERICH3Q5RHP9 1530 aa30.63■■■□□ 2.49
PLXND1-205ENST00000504689 EEA1Q15075 1411 aa30.59■■■□□ 2.49
PLXND1-205ENST00000504689 IGF1RP08069 1367 aa30.59■■■□□ 2.49
PLXND1-205ENST00000504689 SNAPC4Q5SXM2 1469 aa30.57■■■□□ 2.48
PLXND1-205ENST00000504689 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
PLXND1-205ENST00000504689 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
PLXND1-205ENST00000504689 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
PLXND1-205ENST00000504689 CSRNP3Q8WYN3 585 aa30.46■■■□□ 2.47
PLXND1-205ENST00000504689 CUL7Q14999 1698 aa30.45■■■□□ 2.46
PLXND1-205ENST00000504689 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
PLXND1-205ENST00000504689 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
PLXND1-205ENST00000504689 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
PLXND1-205ENST00000504689 CHMP7Q8WUX9 453 aaPredicted RBP30.39■■■□□ 2.46
PLXND1-205ENST00000504689 FBLN2P98095 1184 aa30.35■■■□□ 2.45
PLXND1-205ENST00000504689 PRXQ9BXM0 1461 aa30.34■■■□□ 2.45
PLXND1-205ENST00000504689 CHD1O14646 1710 aa30.31■■■□□ 2.44
PLXND1-205ENST00000504689 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
PLXND1-205ENST00000504689 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
PLXND1-205ENST00000504689 KIF21BO75037 1637 aa30.2■■■□□ 2.43
PLXND1-205ENST00000504689 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
PLXND1-205ENST00000504689 NUP160Q12769 1436 aa30.16■■■□□ 2.42
PLXND1-205ENST00000504689 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
PLXND1-205ENST00000504689 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
PLXND1-205ENST00000504689 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
PLXND1-205ENST00000504689 KIAA0586Q9BVV6 1533 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms