RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
CACNB3-201ENST00000301050 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
CACNB3-201ENST00000301050 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
CACNB3-201ENST00000301050 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
CACNB3-201ENST00000301050 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
CACNB3-201ENST00000301050 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
CACNB3-201ENST00000301050 HRCP23327 699 aa26.81■■□□□ 1.88
CACNB3-201ENST00000301050 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
CACNB3-201ENST00000301050 ABCC9O60706 1549 aa26.63■■□□□ 1.85
CACNB3-201ENST00000301050 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
CACNB3-201ENST00000301050 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
CACNB3-201ENST00000301050 NACADO15069 1562 aa26.27■■□□□ 1.8
CACNB3-201ENST00000301050 PPARGC1BQ86YN6 1023 aaKnown RBP26.21■■□□□ 1.79
CACNB3-201ENST00000301050 PELP1Q8IZL8 1130 aaKnown RBP26.15■■□□□ 1.78
CACNB3-201ENST00000301050 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
CACNB3-201ENST00000301050 RB1CC1Q8TDY2 1594 aa25.98■■□□□ 1.75
CACNB3-201ENST00000301050 RSF1Q96T23 1441 aaPredicted RBP25.75■■□□□ 1.71
CACNB3-201ENST00000301050 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
CACNB3-201ENST00000301050 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.7
CACNB3-201ENST00000301050 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
CACNB3-201ENST00000301050 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
CACNB3-201ENST00000301050 SCAF1Q9H7N4 1312 aaKnown RBP25.46■■□□□ 1.67
CACNB3-201ENST00000301050 WIZO95785 1651 aa25.36■■□□□ 1.65
CACNB3-201ENST00000301050 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
CACNB3-201ENST00000301050 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
CACNB3-201ENST00000301050 BICRAQ9NZM4 1560 aa25.28■■□□□ 1.64
CACNB3-201ENST00000301050 TRIM26Q12899 539 aaPredicted RBP25.25■■□□□ 1.63
CACNB3-201ENST00000301050 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
CACNB3-201ENST00000301050 MYT1Q01538 1121 aa25.18■■□□□ 1.62
CACNB3-201ENST00000301050 LOC105371045A0A1W2PR82 267 aa25.12■■□□□ 1.61
CACNB3-201ENST00000301050 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
CACNB3-201ENST00000301050 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
CACNB3-201ENST00000301050 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
CACNB3-201ENST00000301050 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
CACNB3-201ENST00000301050 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
CACNB3-201ENST00000301050 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
CACNB3-201ENST00000301050 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
CACNB3-201ENST00000301050 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
CACNB3-201ENST00000301050 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
CACNB3-201ENST00000301050 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
CACNB3-201ENST00000301050 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.54
CACNB3-201ENST00000301050 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
CACNB3-201ENST00000301050 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
CACNB3-201ENST00000301050 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
CACNB3-201ENST00000301050 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
CACNB3-201ENST00000301050 CENPBP07199 599 aaPredicted RBP24.41■■□□□ 1.5
CACNB3-201ENST00000301050 NCAPD3P42695 1498 aa24.28■■□□□ 1.48
CACNB3-201ENST00000301050 HMGXB3Q12766 1538 aa24.26■■□□□ 1.47
CACNB3-201ENST00000301050 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
CACNB3-201ENST00000301050 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
CACNB3-201ENST00000301050 SOGA1O94964 1423 aa24.17■■□□□ 1.46
CACNB3-201ENST00000301050 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
CACNB3-201ENST00000301050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.14■■□□□ 1.45
CACNB3-201ENST00000301050 CCER1Q8TC90 406 aaPredicted RBP24.09■■□□□ 1.45
CACNB3-201ENST00000301050 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
CACNB3-201ENST00000301050 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
CACNB3-201ENST00000301050 EEA1Q15075 1411 aa23.98■■□□□ 1.43
CACNB3-201ENST00000301050 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
CACNB3-201ENST00000301050 CFTRP13569 1480 aa23.91■■□□□ 1.42
CACNB3-201ENST00000301050 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
CACNB3-201ENST00000301050 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
CACNB3-201ENST00000301050 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
CACNB3-201ENST00000301050 CUX1P39880 1505 aa23.8■■□□□ 1.4
CACNB3-201ENST00000301050 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
CACNB3-201ENST00000301050 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
CACNB3-201ENST00000301050 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
CACNB3-201ENST00000301050 CEP162Q5TB80 1403 aa23.79■■□□□ 1.4
CACNB3-201ENST00000301050 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
CACNB3-201ENST00000301050 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
CACNB3-201ENST00000301050 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
CACNB3-201ENST00000301050 KIF21BO75037 1637 aa23.72■■□□□ 1.39
CACNB3-201ENST00000301050 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
CACNB3-201ENST00000301050 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
CACNB3-201ENST00000301050 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
CACNB3-201ENST00000301050 MIER1Q8N108 512 aa23.6■■□□□ 1.37
CACNB3-201ENST00000301050 NESP48681 1621 aa23.55■■□□□ 1.36
CACNB3-201ENST00000301050 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
CACNB3-201ENST00000301050 BCL11AQ9H165 835 aa23.54■■□□□ 1.36
CACNB3-201ENST00000301050 KIF27Q86VH2 1401 aa23.52■■□□□ 1.35
CACNB3-201ENST00000301050 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
CACNB3-201ENST00000301050 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
CACNB3-201ENST00000301050 CLIP1P30622 1438 aa23.47■■□□□ 1.35
CACNB3-201ENST00000301050 RANGAP1P46060 587 aaPredicted RBP23.47■■□□□ 1.35
CACNB3-201ENST00000301050 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
CACNB3-201ENST00000301050 ANP32EQ9BTT0 268 aa23.46■■□□□ 1.35
CACNB3-201ENST00000301050 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
CACNB3-201ENST00000301050 CUX2O14529 1486 aa23.42■■□□□ 1.34
CACNB3-201ENST00000301050 LAMC3Q9Y6N6 1575 aa23.37■■□□□ 1.33
CACNB3-201ENST00000301050 DNMBPQ6XZF7 1577 aa23.36■■□□□ 1.33
CACNB3-201ENST00000301050 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
CACNB3-201ENST00000301050 TOPBP1Q92547 1522 aa23.33■■□□□ 1.32
CACNB3-201ENST00000301050 TSHZ2Q9NRE2 1034 aa23.32■■□□□ 1.32
CACNB3-201ENST00000301050 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
CACNB3-201ENST00000301050 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
CACNB3-201ENST00000301050 IGF1RP08069 1367 aa23.3■■□□□ 1.32
CACNB3-201ENST00000301050 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
CACNB3-201ENST00000301050 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
CACNB3-201ENST00000301050 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
CACNB3-201ENST00000301050 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
CACNB3-201ENST00000301050 ARAP1Q96P48 1450 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms