RNA–Protein interactions for RNA: ENST00000300605.10

HDHD2-201, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD2, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-201ENST00000300605 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
HDHD2-201ENST00000300605 SHROOM4Q9ULL8 1493 aa28.81■■■□□ 2.2
HDHD2-201ENST00000300605 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
HDHD2-201ENST00000300605 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
HDHD2-201ENST00000300605 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
HDHD2-201ENST00000300605 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
HDHD2-201ENST00000300605 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
HDHD2-201ENST00000300605 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
HDHD2-201ENST00000300605 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
HDHD2-201ENST00000300605 HRCP23327 699 aa27.17■■□□□ 1.94
HDHD2-201ENST00000300605 ABCC9O60706 1549 aa27.04■■□□□ 1.92
HDHD2-201ENST00000300605 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
HDHD2-201ENST00000300605 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
HDHD2-201ENST00000300605 SCRIBQ14160 1630 aa26.84■■□□□ 1.89
HDHD2-201ENST00000300605 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
HDHD2-201ENST00000300605 NACADO15069 1562 aa26.74■■□□□ 1.87
HDHD2-201ENST00000300605 RB1CC1Q8TDY2 1594 aa26.55■■□□□ 1.84
HDHD2-201ENST00000300605 PPARGC1BQ86YN6 1023 aaKnown RBP26.51■■□□□ 1.84
HDHD2-201ENST00000300605 TRIM26Q12899 539 aaPredicted RBP26.48■■□□□ 1.83
HDHD2-201ENST00000300605 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
HDHD2-201ENST00000300605 CECR2Q9BXF3 1484 aa26.31■■□□□ 1.8
HDHD2-201ENST00000300605 MROH2BQ7Z745 1585 aa26.26■■□□□ 1.79
HDHD2-201ENST00000300605 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
HDHD2-201ENST00000300605 WIZO95785 1651 aa26.15■■□□□ 1.78
HDHD2-201ENST00000300605 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.76
HDHD2-201ENST00000300605 ZEB1P37275 1124 aaPredicted RBP26■■□□□ 1.75
HDHD2-201ENST00000300605 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
HDHD2-201ENST00000300605 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
HDHD2-201ENST00000300605 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
HDHD2-201ENST00000300605 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
HDHD2-201ENST00000300605 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
HDHD2-201ENST00000300605 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
HDHD2-201ENST00000300605 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
HDHD2-201ENST00000300605 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
HDHD2-201ENST00000300605 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
HDHD2-201ENST00000300605 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
HDHD2-201ENST00000300605 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
HDHD2-201ENST00000300605 SOGA1O94964 1423 aa25.38■■□□□ 1.65
HDHD2-201ENST00000300605 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
HDHD2-201ENST00000300605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
HDHD2-201ENST00000300605 TNIKQ9UKE5 1360 aa25.33■■□□□ 1.65
HDHD2-201ENST00000300605 EEA1Q15075 1411 aa25.33■■□□□ 1.65
HDHD2-201ENST00000300605 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
HDHD2-201ENST00000300605 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
HDHD2-201ENST00000300605 CSRNP3Q8WYN3 585 aa25.25■■□□□ 1.63
HDHD2-201ENST00000300605 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
HDHD2-201ENST00000300605 GOLGA3Q08378 1498 aa25.14■■□□□ 1.62
HDHD2-201ENST00000300605 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
HDHD2-201ENST00000300605 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
HDHD2-201ENST00000300605 SCAF1Q9H7N4 1312 aaKnown RBP25.12■■□□□ 1.61
HDHD2-201ENST00000300605 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
HDHD2-201ENST00000300605 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
HDHD2-201ENST00000300605 KIF21BO75037 1637 aa25■■□□□ 1.59
HDHD2-201ENST00000300605 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
HDHD2-201ENST00000300605 DIEXFQ68CQ4 756 aaKnown RBP24.92■■□□□ 1.58
HDHD2-201ENST00000300605 BAZ1BQ9UIG0 1483 aaKnown RBP24.92■■□□□ 1.58
HDHD2-201ENST00000300605 ACIN1Q9UKV3 1341 aaKnown RBP24.85■■□□□ 1.57
HDHD2-201ENST00000300605 CLIP1P30622 1438 aa24.85■■□□□ 1.57
HDHD2-201ENST00000300605 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.57
HDHD2-201ENST00000300605 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
HDHD2-201ENST00000300605 NEUROD1Q13562 356 aa24.77■■□□□ 1.56
HDHD2-201ENST00000300605 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
HDHD2-201ENST00000300605 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
HDHD2-201ENST00000300605 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
HDHD2-201ENST00000300605 ZNF316A6NFI3 1004 aaPredicted RBP24.7■■□□□ 1.55
HDHD2-201ENST00000300605 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
HDHD2-201ENST00000300605 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
HDHD2-201ENST00000300605 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
HDHD2-201ENST00000300605 CENPBP07199 599 aaPredicted RBP24.66■■□□□ 1.54
HDHD2-201ENST00000300605 APLP2Q06481 763 aa24.61■■□□□ 1.53
HDHD2-201ENST00000300605 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
HDHD2-201ENST00000300605 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
HDHD2-201ENST00000300605 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
HDHD2-201ENST00000300605 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
HDHD2-201ENST00000300605 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
HDHD2-201ENST00000300605 CUX1P39880 1505 aa24.44■■□□□ 1.5
HDHD2-201ENST00000300605 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
HDHD2-201ENST00000300605 MIER1Q8N108 512 aa24.35■■□□□ 1.49
HDHD2-201ENST00000300605 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
HDHD2-201ENST00000300605 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
HDHD2-201ENST00000300605 CFTRP13569 1480 aa24.32■■□□□ 1.48
HDHD2-201ENST00000300605 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
HDHD2-201ENST00000300605 DHX57Q6P158 1386 aaKnown RBP24.28■■□□□ 1.48
HDHD2-201ENST00000300605 YTHDC1Q96MU7 727 aaKnown RBP24.27■■□□□ 1.48
HDHD2-201ENST00000300605 RRBP1Q9P2E9 1410 aaKnown RBP24.25■■□□□ 1.47
HDHD2-201ENST00000300605 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
HDHD2-201ENST00000300605 ARHGAP35Q9NRY4 1499 aa24.21■■□□□ 1.47
HDHD2-201ENST00000300605 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
HDHD2-201ENST00000300605 CUX2O14529 1486 aa24.15■■□□□ 1.46
HDHD2-201ENST00000300605 CCNB3Q8WWL7 1395 aa24.1■■□□□ 1.45
HDHD2-201ENST00000300605 IGF1RP08069 1367 aa24.07■■□□□ 1.44
HDHD2-201ENST00000300605 MAP3K1Q13233 1512 aa24.01■■□□□ 1.43
HDHD2-201ENST00000300605 TIAM1Q13009 1591 aa24■■□□□ 1.43
HDHD2-201ENST00000300605 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
HDHD2-201ENST00000300605 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.43
HDHD2-201ENST00000300605 ITGAEP38570 1179 aa23.92■■□□□ 1.42
HDHD2-201ENST00000300605 RAB3GAP2Q9H2M9 1393 aa23.9■■□□□ 1.42
HDHD2-201ENST00000300605 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.41
HDHD2-201ENST00000300605 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.41
HDHD2-201ENST00000300605 MAPKBP1O60336 1514 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms